>NP_777857|1-158 SsrA-binding protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)].
---------------------------------------------------------------MKRNSNRKP
N---------------------EICINRKAKYSFSIK-ETFEAGIVLLGWEVKSVRC-GKINISNSYISLKN
-GEMYLVNSQFDPISKSNLY-ITYECNRIKKILLRKREITYLYSKLYKSHLTIIVLSIFF-KKQWCKVKIGI
AKGKTIKDKREHKKLSEWKKTQNRFVK-RIRH---------------------------
>YP_015961|1-142 SsrA-binding protein [Mycoplasma mobile 163K].
------------------------------------------------------------------------
------MK--------------IIIKNKDAFFNYEIL-EKYKAGLILKGWEVKSIRE-NKVQLKGAFITFKN
-DEAYITNMHISQYMS-----VKGNELEPRKLLLNKHEIRHIQDKKNRNSLAVIPLNLFW-DNNYIKLEIAL
AKGKTKADKRHRILEKDVRKHLKKITY--------------------------------
>YP_287666|1-145 SsrA-binding protein [Mycoplasma hyopneumoniae 7448].
------------------------------------------------------------------------
------ME--------------ILIKNKRANFDYEII-DKFTAGIVLFGWEVKSIQA-KNISLVGAFCYFKG
-HELFLSNAKISEYKG-----SRGQTDRSRKLLMHKHELKKILKEKITRKLAIIPLFIGQ-KNRKIKLEIAL
AKGKTKLDKRNLIKERDQKREVAKFLK-NYY----------------------------
>YP_115624|1-145 SsrA-binding protein [Mycoplasma hyopneumoniae 232].
------------------------------------------------------------------------
------ME--------------ILIKNKRANFDYEII-DRFTAGIVLLGWEVKSIQA-KNISLVGAFCYFKG
-HELFLSNAKISEYKG-----SRGQTDRSRKLLMHKHELKKILKEKITRKLAIIPLFIGQ-KNRKIKLEIAL
AKGKTKLDKRNLIKERDQKREAAKFLK-NYY----------------------------
>YP_279063|1-145 SsrA-binding protein [Mycoplasma hyopneumoniae J].
------------------------------------------------------------------------
------ME--------------ILIKNKRANFDYEII-DRFTAGIVLFGWEVKSIQA-KNISLVGAFCYFKG
-HELFLSNAKISEYKG-----SRGQTDRSRKLLMHKHELKKILKEKITRKLAIIPLFIGQ-KNRKIKLEIAL
AKGKTKLDKRNLIKERDQKREAAKFLK-NYY----------------------------
>NP_853225|1-144 SsrA-binding protein [Mycoplasma gallisepticum R].
------------------------------------------------------------------------
-----MMR--------------LLVNNKKAKYNYELL-DKYEAGISLSGNEVKSLAL-HHGKLDDSYVIIRK
-NEAYLLNLLIPKYKF-DTS-KVLNETRTRKLLLHKSEILKIDLIKKQHSLVIIPYQIYF-VNNKIKVSIYL
ARPKKRYDKRQTIKEREINKKIRKY----------------------------------
>NP_757740|1-146 SsrA-binding protein [Mycoplasma penetrans HF-2].
------------------------------------------------------------------------
------MK--------------ILVVNKKLHFNYEVL-EKIEAGIELKGVEVKSIHL-NNANISDSYVIFKR
-NEAYILNMNIAPYSH-GNI-YNVDPLRTRKLLLHKNEIIKYQMRIKKESLTMVPSKIYW-RKNKLKVEIAL
AKGKKQFDKRQTIKDRDNSREARKHIR-V------------------------------
>NP_077888|1-141 SsrA-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970].
------------------------------------------------------------------------
----------------------MIVSNKHARRNYELL-DFFECGIVLKGTEVKSISR-ANCSINEAYVQIIK
-NQALILNMHVANFFE-GNN-FNQDPYRNRKLLLHKKEIIRLQHLVKTQHMTIVPTKIYW-KNNKLKIEIAL
GKGKQLHDKREDIKKRDLARE-TRLF---------------------------------
>NP_109762|1-147 SsrA-binding protein [Mycoplasma pneumoniae M129].
------------------------------------------------------------------------
------MR--------------VLVNNPRAQYDYYLL-TGYCAGLVLKGSEVKSLAL-GQGSLKEAYVFIDK
-HEVYIKDFSISPYAF-SGE-FNHPFKRVKKLLLNRNEIKQITARQKQEGLSIIPLKVFF-KNGKIKMEIWL
AKPKKKFDKREAIKSKTIQRELRQQYG-SP-----------------------------
>NP_072721|1-145 SsrA-binding protein [Mycoplasma genitalium G37].
------------------------------------------------------------------------
------ML--------------ILVNNPKAKYDYHLM-ESYCAGIVLKGSEVKALSL-GQGSLKEAYVFVKN
-NELFLEQFTIPPYSF-AGP-LNHASDRIKKLLLNKHEIKQIINKKQQQSLSVIPSKVFF-RNGKIKVEIWL
AKPKKKFDKRETIKKKTIRRELEAEYR--------------------------------
>ZP_00405260|1-117 COG0691: tmRNA-binding protein [Mycoplasma genitalium G-37].
------------------------------------------------------------------------
------ML--------------ILVNNPKAKYDYHLM-ESYCAGIVLKGSEVKALSL-GQGSLKEAYVFVKN
-NELFLEQFTIPPYSF-AGP-LNHASDRIKKLLLNKHEIKQIINKKQQQSLSVIPSKVFF-RNGKIKVEI--
-----------------W-----------------------------------------
>YP_456770|1-152 tmRNA-binding protein [Aster yellows witches'-broom phytoplasma AYWB].
------------------------------------------------------------------------
------MK--------------TIITNKKAFYDYSLEKKKYQAGIKLLGSEVKSIRI-GKINLLNSYIHIKN
-EEVFIVNMTILKYPF-SCC-LVYDENRTKKLLLQKYEIIQIQKKIKTEKLSVIPLKVYF-NKNLVKLEIAL
AKGKKKHDKRNALKDFNAKLRIQKTLK-NFNKKQ-------------------------
>NP_950398|1-152 SsrA-binding protein [Onion yellows phytoplasma OY-M].
------------------------------------------------------------------------
------MK--------------TIITNKKAFYDYSLEKKKYQAGIKLLGSEVKSIRI-GKINLLNSYIHIKN
-EEAFIVNMTILKYPF-SCC-LAYDENRTKKLLLQKHEIIQIKNKIKTEKLSVIPLKVYF-NKNLVKLEIAL
SKGKKQHDKRNALKDFDAKLRIQKTLK-NFNQKQ-------------------------
>AAS20954|1-72 small protein B [Clover phyllody phytoplasma].
------------------------------------------------------------------------
------------------------------------------------------------------------
--------------------------------LLQKHEIIQIKNKIKTEKLSVIPLKVYF-NKNLVKLEIAL
AKGKKQHDKRNALKDFDAKLRIQKTLK-NFNQKQ-------------------------
>NP_975827|1-148 SsrA-binding protein [Mycoplasma mycoides subsp. mycoides SC str. PG1].
-----------------------------------------------------------------------M
S-----EH--------------LIVKNKKAYFNYEII-QTYQAGIVLNGPEIKSIRN-HDVSINEAFVLIRK
-KEIYILNMNVKKYQF-ANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPVKLYF-KNDYVKLEIAL
AKGKKLHDKRQTIKKRDTERKELKNYK--------------------------------
>YP_424090|1-148 SsrA-binding protein [Mycoplasma capricolum subsp. capricolum ATCC 27343].
-----------------------------------------------------------------------M
S-----EH--------------LIVKNKKAYFNYEII-QTYQAGIVLNGPEIKSIRN-HDVSINEAFVLIRK
-KEIYILNMNVKKYQF-ANYIKGLEETRTRKLLLHKKEIIKILNKIKQENLTIIPIKLYF-KNDYVKLEIAL
AKGKKLHDKRQTIKKRDTERKELRDYK--------------------------------
>CAK98411|1-143 probable ssra-binding protein rna-binding [Spiroplasma citri].
------------------------------------------------------------------------
------ML--------------TITVNKKARYNYEII-ETYEAGIVLTGSEIKSIRN-NDVSINEAFVIIRK
-NEAFAINMIIAQYKF-STA-YVPDADRTRKLLLHKKEIKKILQRIKLERLTLVPLKLYL-KNNYAKLEIAL
VRGKKNYDKRETIKQRDNERLRRKY----------------------------------
>YP_053451|1-149 SsrA-binding protein [Mesoplasma florum L1].
-----------------------------------------------------------------------M
G-----EH--------------VIALNKKAKFNYEIL-ETWEAGIELYGPEIKSIRN-HEANIAEAFILIRK
-KEAFLINANIKKYDY-ANFVKGIDPLRTRKLLLHKKEINKILKRVMLEKLTIVPLRLYL-KGNYAKLEIGL
GRGKKIHDKRETIKKRDIERKEMRKYK-Y------------------------------
>NP_240078|1-162 SsrA-binding protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)].
---------------------------------------------------------------MLQKKKYQK
K-----SS--------------KIIINKKAYYNYFIE-KVFQSGLVLEGWEIKSIRS-GKVNISESYIINDR
-NEMYLCNCLIEPLQMSSNR-FSCDPTRKKKLLLHKNEIDFLSLKKKNTGYTMVSLSLFW-KKSWCKLEFGL
AKGKTAQDKRINLKKREWEQEKLKILK-KTKETY-------------------------
>NP_660593|1-163 SsrA-binding protein [Buchnera aphidicola str. Sg (Schizaphis graminum)].
---------------------------------------------------------------MSYKKKRCL
K-----SS--------------IICKNKKAYYNYFIE-EVFQSGLVLMGWEVKSIRL-GQVNIIESYINNDN
LNEMYLYNSIVQPLHTSSNY-VSCDSSRKRKLLLHKNEIQYLCNKKNKIGSTLVALSLFW-EKSWCKLNFGL
AKGKTKIDKRASEKQNEWKKEKLKILK-KVKFQN-------------------------
>YP_072484|1-150 SsrA-binding protein [Borrelia garinii PBi].
----------------------------------------------------------------------MN
T-----NT--------------LLLENKKAKFNYFIE-EKVSCGIVLKGTEVKSIKA-KKLSFNNSFASIKK
-EEFWLENLHVSKYKE-GNI-FNHDELRPRKLLIKKQELQRLKKFKEKEGYTLIPISFYL-KKSIIKVEVGI
CKGKKLYDKREILKQKSIKKDLSREIK-YK-----------------------------
>NP_212167|1-150 SsrA-binding protein [Borrelia burgdorferi B31].
----------------------------------------------------------------------MN
T-----NN--------------LLLENKKAKFNYFIE-EKISCGIVLKGTEVKSIKA-KKLSFNNSFASIKK
-EELWLENLHVSKYKE-GNI-FNHDELRPRKLLIKKRELQRLKKFKEKEGYTLIPISFYL-KKSIIKVEVGI
CKGKKLYDKREILKQKSIKKDLSREIK-YK-----------------------------
>YP_709473|1-150 small protein [Borrelia afzelii PKo].
----------------------------------------------------------------------MN
T-----NT--------------LLIENKKAKFNYFIE-EKISCGIVLKGTEVKSIKA-KKLSFNNSFAIIKK
-EELWLENLHVSKYKE-GNI-FNHDELRPRKLLIKKKELQRLKKFKEKEGYTLIPISFYL-KKSIIKVEVGI
CKGKKLYDKREILKQKSIKKDLSREIK-YK-----------------------------
>NP_972070|1-154 SsrA-binding protein [Treponema denticola ATCC 35405].
--------------------------------------------------------------------MEKT
P-----VK--------------IIAKNKKAFFNYTVE-EKIECGLVLKGTEVKSLRE-GRISFPDAFAEIKD
-NEVWVKNFHISEYIY-SSV-FNHDPERPKKLLLKKDEIKRLKRKVEEKGYTLVPLEFYF-KNGIVKVLLGV
CKGKKTFDKRADIKDRDIKRDMQREIK-IRGK---------------------------
>NP_218623|1-134 SsrA-binding protein [Treponema pallidum subsp. pallidum str. Nichols].
------------------------------------------------------------------------
-----------------------------------ME-DRLECGIALEGTEVKSVRA-GHLSFPDAFAEMRG
-GELWLKNVHIAEYVH-ACS-FAPNPDRMRKLLAHRDQIARLKRKVEEKGYTLVPLEFYL-KAGRVKVALGI
CKGKKLFDKRAQIKARDNARELSRSLC-ERHH---------------------------
>YP_278600|1-143 SsrA-binding protein [Mycoplasma synoviae 53].
------------------------------------------------------------------------
------MK--------------IIATNKNAKRNYEIL-KTFEAGIKLEGWEVKSARA-SSVELKNAYCSIYK
-DEVFLKESYFKKYML-----LKVEETKNRKLLLHKKEILKIKQEL-QKNLSLIPTKIYFNSNSLIKVELAL
GRGLKKYDKREKLKKEEVEKKLKKILK-F------------------------------
>NP_326183|1-145 SsrA-binding protein [Mycoplasma pulmonis UAB CTIP].
------------------------------------------------------------------------
-----MAK--------------LITKNKQVFRDYEII-DKLEAGIVLQGWEVKSIRA-SDVNLKGSYCVFKA
-NELYLINSYIGLYMA-----VKGDERQSRKLLLHKNQLRRLKQKVESQSLSIVPLSLYWNKKSKVKAEIAL
VRGLKKHDKREKLKKEETNKKLKKLIS-Y------------------------------
>NP_871115|1-160 SsrA-binding protein [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis].
----------------------------------------------------------------MKKKNTEK
N-----FL--------------IISRNKRAKYNTYIK-KEMEAGLSLKGWEVKSLRS-NNISISTSYVTLKS
-SSAYLTGAVFQSNTNNNMN-FIYEKERNIQLLLHKHEINSLFGYVKIKGYSIVVISLYW-KYHKAKLKIGI
AKGKKKIDKRLEIKKREWEIKKSRLFK-KNKIY--------------------------
>YP_798358|1-160 ssrA|tmRNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis L550].
-----------------------------------------------------------------MANKKEE
P-----GH--------------SPLVNKKAKFNFELV-SFIEAGIVLSGSEVKSLRE-KKGNLTDAFAKIKN
-GEVFLENFSITPYKN-GGY-VNHPEIRPRKLLLHKKEIEKLERQVKEKGLVLVATKVYFKNNLRVKVEIAV
GKPKKIHDKRDDMQKKDAQQEIARALK-SSNRYE-------------------------
>NP_711483|1-160 SsrA-binding protein [Leptospira interrogans serovar Lai str. 56601].
-----------------------------------------------------------------MVKKKEE
S-----GH--------------SPLVNKKAKFNFELI-SFIEAGIVLSGSEVKSLRD-KKGNLTDAFAKIKN
-GEVFLENFSIAPYKN-GGY-ANHPEIRPRKLLLHKKEIEKLERQVKEKGLVLVATKVYFKNNLRVKVEIAV
GKPKKLHDKRDDLQKKDAQQEIARALK-SSNRYQ-------------------------
>YP_002349|1-160 SsrA-binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130].
-----------------------------------------------------------------MVKKKEE
S-----GH--------------SPLVNKKAKFNFELI-SFLEAGIVLSGSEVKSLRD-KKGNLTDAFAKIKN
-GEVFLENFSIAPYKN-GGY-ANHPEIRPRKLLLHKKEIEKLERQVKEKGLVLVATKVYFKNNLRVKVEIAV
GKPKKLHDKRDDLQKKDAQQEIARALK-SSNRYQ-------------------------
>YP_392957|1-150 SmpB protein [Thiomicrospira denitrificans ATCC 33889].
------------------------------------------------------------------------
M-----GE--------------NIAKNKKAYFDYFLE-EKFEAGLVLKGSEIKAIRA-GRVNLKDSFIRFVQ
-GEAFLFNAHIGRLETTHHF-YAHEERGSRKLLLHKKQIQKMIKAVEKDGYTVVPLQLYFNDRNIVKIQIAI
AKGKQLHDKRNDLKEKDMKRDMERSMK-DY-----------------------------
>YP_664025|1-152 SsrA-binding protein [Helicobacter acinonychis str. Sheeba].
------------------------------------------------------------------------
------MK--------------LIASNKKAYFDYEIL-ETLEAGLVLLGSEVKALRQ-TRVNLKDNFVKIIK
-GEAFLFGVHISYLDTIHAY-YKPNERRERKLLLHKKQLLKWQIEASKERLSIVGLKLYFNQRNRAKIQIAL
VKGKKLHDKRQNLKEKALNKEILADLK-HHFKG--------------------------
>NP_208235|1-152 SsrA-binding protein [Helicobacter pylori 26695].
------------------------------------------------------------------------
------MK--------------LIASNKKAYFDYEIL-ETLEAGLALLGSEVKALRQ-TRVNLKDNFVKIIK
-GEAFLFGVHISYLDTIHAY-YKPNERRERKLLLHKKQLLKWQIEASKERLSIVGLKLYFNQRNRAKIQIAL
VKGKRLHDKRQSLKEKALNKEILADLK-HHFKG--------------------------
>NP_224055|1-152 SsrA-binding protein [Helicobacter pylori J99].
------------------------------------------------------------------------
------MK--------------LIASNKKAYFDYEIL-ETLEAGLALLGSEVKALRQ-TRVNLKDNFVKIIK
-GEAFLFGVHISYLDTIHAY-YKPNERRERKLLLHKKQLLKWQMEASKERLSIVGLKLYFNQKNRAKIQIAL
VKGKRLHDKRQSLKEKALNKEILADLK-HHFKG--------------------------
>NP_859652|1-155 SsrA-binding protein [Helicobacter hepaticus ATCC 51449].
-----------------------------------------------------------------------M
P-----IR--------------VIAKNKKAYFDYEIL-QSLESGIVLQGSEVKSIRA-GRVNLKDSFIKIIR
-GEAFLFNAHISFLQTTYTH-FKPNERRERKLLLHKKEIDKLFGSVSKESLSIVPLNIYFNQKNKIKLCIAL
VRGKKLHDKRESIKKKMLEREARAHMK-SYGKKL-------------------------
>NP_907089|1-151 SsrA-binding protein [Wolinella succinogenes DSM 1740].
-----------------------------------------------------------------------M
A-----RK--------------VIANNKKALFDFHIL-ERLEAGIALSGSEVKAIRA-GRVNLKDSFVKIIK
-GEAFLLNAHISYLETTNPH-YKPDERRPRKLLLHRKQIDKLTGSVSTEGMTLVTLSIYFNERNRAKAEIAL
AKGKNLHDKRETLKKRILDREVKAALK-EH-----------------------------
>YP_891887|1-151 SsrA-binding protein [Campylobacter fetus subsp. fetus 82-40].
------------------------------------------------------------------------
M-----SK--------------DLARNKKAFHDYAIL-ETFEAGIALKGSEVKALRA-GRANLKDSFVRIIR
-GELFLLNAHISYLDTTNSY-FRPDERAPRKLLMHRRQIDKLFGKVSTDGLTMVALSLYLNSKNIVKANIAL
AKGKNLHDKREALKQKEANIEARSALK-KYI----------------------------
>ZP_01376255|1-150 hypothetical protein Ccur5_01001002 [Campylobacter curvus 525.92].
------------------------------------------------------------------------
------MK--------------DLAKNKKALHDFSIL-ETFEAGVVLKGSEVKALRA-GRANLKDSFVRIIK
-GEIFLLNAHISHLDTTNSH-FRPDERAPRKLLMHRKQIDKLFGSVTKDGLTMVALALYLNDKNIIKARVAL
AKGKNLHDKRETLKKREADMEARAAMK-KFI----------------------------
>ZP_01373844|1-151 hypothetical protein Ccon1_01001532 [Campylobacter concisus 13826].
------------------------------------------------------------------------
M-----IK--------------DLAKNKKALHDFSIL-ETFEAGIVLKGSEVKALRA-GRANLKDSFVRVIK
-GELFLLNAHISYLETTHSA-FRPNERAARKLLMHRKQIDKIFGQVSQDGLALVVLALYLSDKNIVKARLAL
AKGKNLHDKRETLKRREADKEARAAIK-RYV----------------------------
>ZP_00368419|1-152 SsrA-binding protein [Campylobacter lari RM2100].
-----------------------------------------------------------------------M
M-----KK--------------TIVKNKKAFFDYEIL-EKFEAGIVLKGSEVVALRA-SRANLKDSFVRIIK
-GEIFLLNAHISHLSTTHAF-YKHEEKGARKLLMHKKQIDKLFGKISTQGFTIVPLELYFNEKNKAKVLIAL
AKGKNLHDKRESLKKKQADLEARAAMK-NHY----------------------------
>ZP_00367131|1-150 SsrA-binding protein [Campylobacter coli RM2228].
------------------------------------------------------------------------
------MK--------------VIARNKKALFDYSII-ERFESGVVLKGSEVVALRA-GRANLKDSFVRIIK
-GELFLLNAHISHLSTTHSY-YKHEERAARKLLMHRKQIDKLLGKVSIEGYTLVVLELYFNHKNKVKATLAL
AKGKNLHDKRESLKKKQADMEARSAMK-NYK----------------------------
>ZP_00370201|1-150 SsrA-binding protein [Campylobacter upsaliensis RM3195].
------------------------------------------------------------------------
------MK--------------IIARNKKALFDYHII-ERFEAGIVLKGSEVVALRA-GRANLKDSFVRIIR
-RELFLLNAHISLLSTTHSF-YRHEERGARKLLMHRKQIDKLLGKVSVEGYTLIALDLYFNAKNKAKLTLAL
AKGKTLHDKREVLKKKQADLDAKMAMK-NYK----------------------------
>ZP_01099306|1-150 SsrA-binding protein [Campylobacter jejuni subsp. jejuni 84-25].
------------------------------------------------------------------------
------MK--------------IIARNKKALFDYSII-ERFEAGIVLKGSEVVALRA-GRANLKDSFVRIIK
-NEIFLLNSHISLLHTTHSF-YKHKERGARKLLMHRKQIDKLLGKVSIEGYTIVALDLYFNTKNKVKATLAL
AKGKNLHDKRETLKKKQADLEARAAMK-NYK----------------------------
>YP_179236|1-150 SsrA-binding protein [Campylobacter jejuni RM1221].
------------------------------------------------------------------------
------MK--------------IIARNKKALFDYSII-ERFEAGIVLKGSEVVALRA-GRANLKDSFVRIIK
-NEIFLLNSHISLLHTTHSF-YKHEERGARKLLMHRKQIDKLLGKVSIEGYTIVALDLYFNTKNKVKATLAL
AKGKNLHDKRETLKKKQADLEAKAAMK-NYK----------------------------
>ZP_01068923|1-150 SsrA-binding protein [Campylobacter jejuni subsp. jejuni 260.94].
------------------------------------------------------------------------
------MK--------------IIARNKKALFDYSII-ERFEAGIVLKGSEVVALRA-GRANLKDSFVRIIK
-NEIFLLNSHISLLHTTHSF-YKHEERGARKLLMHRKQIDKLLGKVSIEGYTIVALDLYFNTKNKVKATLAL
AKGKNLHDKRETLKKKQADLEARVAMK-NYK----------------------------
>ZP_01378408|1-150 hypothetical protein Cjejd_01000687 [Campylobacter jejuni subsp. doylei 269.97].
------------------------------------------------------------------------
------MK--------------IIARNKKALFDYSII-ERFEAGIVLKGSEVVALRA-GRANLKDSFVRIIK
-SEIFLLNSHISLLHTTHSF-YKHEERGARKLLMHRKQIDKLLGKVSIEGYTIVALDLYFNTKNKVKATLAL
AKGKNLHDKRETLKKKQADLEARAAMK-NYK----------------------------
>NP_282253|1-150 SsrA-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168].
------------------------------------------------------------------------
------MK--------------IIARNKKALFDYSII-ERFEAGIVLKGSEVVALRA-GRANLKDSFVRIIK
-NEIFLLNSHISLLHTTHSF-YKHEERGARKLLMHRKQIDKLLGKVSIEGYTIVALDLYFNTKNKVKATLAL
AKGKNLHDKRETLKKKQADLEARAAMK-NYK----------------------------
>YP_822342|1-156 SsrA-binding protein [Solibacter usitatus Ellin6076].
-----------------------------------------------------------------MADKKDF
A-----FK--------------ILSDNRQAGHNYFLS-ERFECGMVLTGTEVKAAKD-AKIQLKDAYASVLG
-DEAWLLNAHISQYSH-GNR-ENHLPVRNRKLLLHRREIDKLQEITREKGLALIPTKIYM-KNGKIKCEIAV
AKGKKLYDKRAADKARTADDEARAEMR-RRA----------------------------
>NP_904797|1-153 SsrA-binding protein [Porphyromonas gingivalis W83].
-----------------------------------------------------------------MKEKIQK
N---------------------ILIKNKRATFDYEIL-DVYTAGIVLVGTEIKSLRL-GKGGLVDTYCYFHR
-GELWVKNMYIAEYFY-GTY-NNHVARRDRKLLLNRKELRKLEEASKSMGTTIVPLKLFINERGLAKLQIGL
ARGKKQYDKRASIKERDDRREMDRALK-R------------------------------
>NP_809092|1-150 SsrA-binding protein [Bacteroides thetaiotaomicron VPI-5482].
--------------------------------------------------------------------MKQP
S---------------------VNIKNKRATFDYELM-DTYTAGIVLTGTEIKSIRL-GKASLVDTFCYFAK
-GELWVKNMHIAEYFY-GSY-NNHTARRDRKLLLNKKELEKIQRGMKDPGFTTVPVRLFINEKGLAKLVVAL
AKGKKQYDKRESIKEKDDRRDMARMFK-R------------------------------
>YP_100479|1-150 SsrA-binding protein [Bacteroides fragilis YCH46].
--------------------------------------------------------------------MKLA
P---------------------INIKNKRATFDYELI-DTYTAGIVLTGTEIKSIRL-GKASLVDTFCYFAK
-GELWVKNMHIAEYFY-GSY-NNHAARRDRKLLLSKKELNKLERGTKDAGFTIVPVRLFINERGLAKVVVAL
AKGKKQYDKREALKEKDDRRDMDRMFK-R------------------------------
>YP_678563|1-153 SsrA RNA binding protein [Cytophaga hutchinsonii ATCC 33406].
------------------------------------------------------------------MSTKEI
V-----KN--------------VNIKNKKASFEYEFL-EKYEAGIVLKGTEIKAIRM-SKASISEAYCLFDN
-EELWIKNMNISSYDK-GSF-YNHDPLSARKLLLRKAELKKLFMHSKEKGLTIIALRLFTNERGYAKIEIAL
AKGKKLYDKRESIKSKDNEREMQRIRI--------------------------------
>ZP_01243086|1-151 SmpB protein [Flavobacterium johnsoniae UW101].
---------------------------------------------------------------------MLK
S---------------------VNILNKRARFDYEII-DTYTAGIVLAGTEIKSIRL-GKANITESFCEFSG
-IELFAINTYIEEYSF-GNQ-FNHKSRSERKLLLNKKELKSLHKSVQAKGLTIVPLKLFTNEKGLAKLQIGL
CKGKKNYDKRESLKEQDTKRDLDRIKK-AYN----------------------------
>ZP_01121362|1-153 SsrA-binding protein [Robiginitalea biformata HTCC2501].
---------------------------------------------------------------------MQK
Q---------------------INIKNRRARFDYELL-DTYVAGIVLAGTEIKSIRQ-GKASIAEGFCEFNE
DGELFVINMQVDEYSH-GSH-FNHQPKAARKLLLNKQELGKLHKAVKTSGNTIIPLNLFINDRGLAKLRIAL
ARGKKQYDKRDTIRARESKRQLDRVKK-AFNS---------------------------
>YP_862302|1-157 SsrA-binding protein [Gramella forsetii KT0803].
---------------------------------------------------------------MYFCGYMKN
S---------------------INIKNRKAKFNYEFL-DKYTAGIKLAGTEIKAIRE-GKANIAESFCEFNN
-HELFVINMHVEEYSH-ATH-FNHNPRSQRKLLLQRRELRKLEKEVTNSGLTIIPLRLFINDRGLAKLQISL
AKGKKLYDKRETIKDRESKRRLDRIQK-EYK----------------------------
>ZP_01050546|1-153 putative SsrA-binding protein [Cellulophaga sp. MED134].
---------------------------------------------------------------------MSN
T---------------------VNIKNRKARFEYEIL-DRLVAGIVLAGTEIKAIRE-GKASIAESFCEFND
QGEMFVINMTVQEYSH-ATY-FNHNPKSERKLLLNKRELKKWEREVNKSGLTIVPLRLFTNEKGFAKLEIAL
AKGKKTYDKRETIKDRDNKKNLDRIKK-AFNN---------------------------
>ZP_01202790|1-153 SsrA-binding protein [Flavobacteria bacterium BBFL7].
-------------------------------------------------------------------MKFKN
N---------------------IEIKNRKARFEYEIL-DKYMAGIVLGGTEIKAIRL-GKASIAEGFCEFTD
-GELWIINMTVQEYSH-ATY-FNHQPKQARKLLLNRKELKKLEKDVNSSGNTIIPLRLFINDKGLAKMDIAL
AKGKKLHDKRETIKDRDNKKRLDQIKK-AYK----------------------------
>ZP_01061647|1-154 SsrA-binding protein [Flavobacterium sp. MED217].
---------------------------------------------------------------------MKQ
A-----NT--------------INIKNKKARFEYELL-DKYTAGIKLAGTEIKSIRE-GKASIAESFCEFQD
-NELFVINMTIQEYSH-ATY-FNHNPKNSRKLLLNRRELNKLHKEVRNSGLTIVPLRLFINDRGLAKMQIAL
AKGKKLYDKREAIKERDSKKRLGQIKK-AFNN---------------------------
>ZP_01107731|1-153 SsrA-binding protein [Flavobacteriales bacterium HTCC2170].
---------------------------------------------------------------------MQT
N---------------------INIKNKKARFEYEIL-DKYTAGIVLSGTEIKSIRQ-SKASISESFCEFND
NGELFIINMQIDEYSH-ASH-YNHKPKAERKLLLNKRELKKLQKEVASSGLTIIPLNLFLNERGLAKMNIAL
AKGKKLYDKRETMKDRDNKRDLDRIKK-SFNN---------------------------
>ZP_01253429|1-154 ssrA-binding (tmRNA-binding) protein [Psychroflexus torquis ATCC 700755].
----------------------------------------------------------------------MV
K-----NK--------------INIKNKKARFQYEIL-DKYTAGIVLAGTEIKSIRE-GKATITESFCEFNE
QGELFVINMDVQEYSH-ATH-FNHKPKNARKLLLNKKELKKLLKEVKNSGLTIIPLRLFLNDRGFAKLQIAL
SKGKKLHDKRETIKDRDTKRKLNRINK-TFNT---------------------------
>NP_967608|1-152 SsrA-binding protein [Bdellovibrio bacteriovorus HD100].
---------------------------------------------------------------------MSE
N-----IL--------------IVHENKKARFDYTIV-ETYEAGLQLMGSEVKSLRN-KDVQLKDSYISFKG
-DEAYLQNAHIAEYKA-SSY-NNHVPERHRKLLMHRNELDEIFEALREKGYSCVPLKIYF-KNGRAKLQIAL
VKGKKTHDKREAIKKRDVSDQIRSSLR-RSR----------------------------
>NP_299627|1-167 SsrA-binding protein [Xylella fastidiosa 9a5c].
----------------------------------------------------------MNNKHPENKAKSTT
T-----PK--------------TIALNKRARHEYHLI-ERHEAGLELQGWEVKAIRA-GRANLADGYAYVRD
-GEIFLIGAQITPLIQASTH-VVANDRRTRKLLLHRRQIDTLIGRVQREGFTLVPTAMYW-SKNRVKMEIAL
AKGKQAHDKRHAEKEREWQRDKQRIMR-AHNRNA-------------------------
>NP_779576|1-167 SsrA-binding protein [Xylella fastidiosa Temecula1].
----------------------------------------------------------MNNKHPKNKAKSTT
T-----PK--------------TIALNKRARHEYHLI-ERHEAGLELQGWEVKAIRA-GRANLGDGYAYVRD
-GEIFLIGAQITPLIQASTH-VVANDRRTRKLLLHRHQIDTLIGRVQREGFTLVPTAMYW-SKNRVKMEIAL
AKGKQAHDKRHAEKEREWQRDKQRIMR-AHNRNA-------------------------
>ZP_00652421|1-167 SmpB protein [Xylella fastidiosa Dixon].
----------------------------------------------------------MNNKHPKNKAKSTT
T-----PK--------------TIALNKRARHEYHLI-ERHEAGLELQGWEVKAIRA-GRANLGDGYAYVRD
-GEIFLIGAQITPLIQASTH-VVANDRRTRKLLLHRRQIDTLIGRVQREGFTLVPTAMYW-SKNRVKMEIAL
AKGKQAHDKRHAEKEREWQRDKQRIMR-AHNRNA-------------------------
>ZP_00680531|1-167 SmpB protein [Xylella fastidiosa Ann-1].
----------------------------------------------------------MNNKHPKNKAKSTT
T-----PK--------------TIALNKRARHEYHLI-ERHEAGLELQGWEVKAIRA-GRANLGDGYAYVRD
-GEIFLIGAQITPLIQASTH-VVANDRRTRKLLLHRRQIDTLIGRVQREGFTLVPTAIYW-SKNRVKMEIAL
AKGKQAHDKRHAEKEREWQRDKQRIMR-AHNRNA-------------------------
>ZP_01643962|1-167 SsrA-binding protein [Stenotrophomonas maltophilia R551-3].
----------------------------------------------------------MSKNSVKDKAKSAT
A-----NK--------------TIALNKRARHEYHIE-ERFEAGLALQGWEVKSIRA-GRGNIIDAYAYVKQ
-GEIFLIGAQITPLIQASTH-VVANDRRERKLLLHRSEIDKLVGKVERDGYTIVPTAMYW-SKNKIKLEVAL
AKGKQTHDKRDAAKDRDWAIEKQRVMR-RGNRDA-------------------------
>NP_636838|1-167 SsrA-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913].
----------------------------------------------------------MSKKPAKDKAKSAT
A-----TK--------------TIALNKRARHEYHLE-ERYEAGLALQGWEVKAIRA-GRANIVDGYAYVRS
-GEIYLIGAQITPLIQASTH-VIPVERRDRKLLLHRAEIDKVLTRVEREGYTLVPTALYW-SSNKVKLEIAL
AKGKQSHDKRDAAKERDWQRDKQRVMR-RHNRDA-------------------------
>NP_641846|1-167 SsrA-binding protein [Xanthomonas axonopodis pv. citri str. 306].
----------------------------------------------------------MSKKQTKDKANGAK
A-----TK--------------TIALNKRARHEYHLE-ERYEAGLALQGWEVKAIRA-GRANIVDGYAYVRS
-GEIYLIGAQITPLIQASTH-TVPVERRDRKLLLHRAEIDKVLSRVEREGYTLVPTALYW-SSNKVKLEIAL
AKGKQNHDKRDAAKDRDWQRDKQRVMR-RHNRDA-------------------------
>YP_363287|1-167 SsrA-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10].
----------------------------------------------------------MSKKQTKDKANGAK
A-----TK--------------TIALNKRARHEYHLE-ERYEAGLALQGWEVKAIRA-GRANIVDGYAYVRS
-GEIYLIGAQITPLIQASTH-TVPVERRDRKLLLHRAEIDKVLTRVEREGYTLVPTALYW-SSNKVKLEIAL
AKGKQNHDKRDAAKDRDWQRDKQRVMR-RHNRDA-------------------------
>YP_200662|1-167 SsrA-binding protein [Xanthomonas oryzae pv. oryzae KACC10331].
----------------------------------------------------------MSKKPTKDKANGAK
A-----TK--------------TIALNKRARHEYHLE-ERYEAGLALQGWEIKAIRA-GRANIVDGYAYVRS
-GEIYLIGAQITPLIQASTH-TVPVERRDRKLLLHRAEIDKVLTRVEREGYTLVPTALYW-SSNKVKLEIAL
AKGKQNHDKRDAAKERDWQRDKQRVMR-RHNRDA-------------------------
>YP_450933|1-167 small protein B [Xanthomonas oryzae pv. oryzae MAFF 311018].
----------------------------------------------------------MNKKPTKDKANGAK
A-----TK--------------TIALNKRARHEYHLE-ERYEAGLALQGWEIKAIRA-GRANIVDGYAYVRS
-GEIYLIGAQITPLIQASTH-TVPVERRDRKLLLHRAEIDKVLTRVEREGYTLVPTALYW-SSNKVKLEIAL
AKGKQNHDKRDAAKERDWQRDKQRVMR-RHNRDA-------------------------
>YP_898804|1-157 SsrA (tmRNA)-binding protein [Francisella tularensis subsp. novicida U112].
------------------------------------------------------------------MSKHKV
S-----PA--------------TIAKNKKALHDYTIL-EKFEAGIVLQGWEVKSIRA-GKVQMVDSHVHIKH
-GEAWLFNCLITPLLSASTH-VVADAAATRKLLLNRREINKIMGRIEQKGFTCVPLAMYW-KGPRVKVEIAL
AQGKKVHDKRQAQKDKDWAREKDRLFK-KAYK---------------------------
>AAX78119|1-192 unknown protein [synthetic construct].
----------------------------------------MGHHHHHHHHHHSSGHIDDDDKHMLEMSKHKV
S-----PA--------------TIAKNKKALHDYTIL-EKFEAGIVLQGWEVKSIRA-GKVQMVDSHVHIKH
-GEAWLFNCLITPLLSASTH-VVADAAATRKLLLNRREINKIMGRIEQKGFTCIPLSMYW-KGPRVKVEIAL
AQGKKVHDKRQAQKDKDWAREKDRLFK-KAYKYPYDVPDYA------------------
>YP_170148|1-157 SsrA-binding protein [Francisella tularensis subsp. tularensis SCHU S4].
------------------------------------------------------------------MSKHKV
S-----PA--------------TIAKNKKALHDYTIL-EKFEAGIVLQGWEVKSIRA-GKVQMVDSHVHIKH
-GEAWLFNCLITPLLSASTH-VVADAAATRKLLLNRREINKIMGRIEQKGFTCIPLSMYW-KGPRVKVEIAL
AQGKKVHDKRQAQKDKDWAREKDRLFK-KAYK---------------------------
>YP_047438|1-158 SsrA-binding protein [Acinetobacter sp. ADP1].
--------------------------------------------------------------MSKAVVVKKN
N-----GG--------------TIAQNKRARHDYFIE-EKFEAGMSLQGWEVKSLRA-GRMSLTESYIIFKN
-GEAYLFGAQIQPLLTASSH-VVPEATRTRKLLLSRREIGQLLGAVNQKGYSCVPLACYW-KGHLVKLEIAL
VKGKQLHDKRATEKDRDWQRDKARIMH-K------------------------------
>ZP_01272980|1-158 SmpB protein [Psychrobacter sp. PRwf-1].
-----------------------------------------------------------------MAKKTKK
P-----SN--------------QIAANKKARHEYFIE-ETYEAGLVLQGWEVKAIRA-GKMSITEAYVVFRG
-NEAFLFGAHIQPLLSSSTH-VDPDSIRTRKLLLNRKEIDTLFGAVNQKGYACVPLEVYW-KDSLVKCKIGL
AKGKKLHDKRKTLKDRDWERDKERGFK-QHLD---------------------------
>YP_579626|1-158 SsrA-binding protein [Psychrobacter cryohalolentis K5].
-----------------------------------------------------------------MSKKSKK
P-----EN--------------QICANKKARHEYFIE-ETFEAGLSLQGWEVKAIRA-GKMTITEAYIIFRN
-NEAFLFGAHIQPLLSSSTH-VSPDSIRTRKLLLNRREIEKLMGAVNQKGYACVPLSCYW-KNSLVKCQIGL
ALGKKQHDKRKTLKDRDWERDKQRGFK-KDLD---------------------------
>YP_263628|1-158 SsrA-binding protein [Psychrobacter arcticus 273-4].
-----------------------------------------------------------------MSKKSKK
P-----EN--------------QICANKKARHEYFIE-ETFEAGLSLQGWEVKAIRA-GKMTITEAYIIFRN
-NEAFLFGAHIQPLLSSSTH-VSPDSIRTRKLLLNRREIEKLFGAVNQKGYACVPLSCYW-KNSLVKCQIGL
ALGKKQHDKRKTLKDRDWERDKQRGFK-KDLD---------------------------
>YP_528213|1-162 ssrA-binding protein (Small protein B) [Saccharophagus degradans 2-40].
-----------------------------------------------------------MRPMSKANKKKKP
Q-----SS--------------TIAQNKRARHDYFLE-TKFEAGVALLGWEVKALRA-QRGQMTESYVLVQN
-GEAWLQGAQIQPLPQACTH-YVTEPARPRKLLLNRRELNKIAEAKDQKGYTIVATSLYW-KAHMVKCEIAI
AKGKQLHDKRQTEKEREWNIQKQRVLY-DK-----------------------------
>ZP_01076134|1-160 SmpB protein [Marinomonas sp. MED121].
---------------------------------------------------------------MSKAKKKSN
T-----SG--------------TIALNKRARHDYFIE-QKFEAGICLTGWEVKSLRA-GKAQLVDSHVFLRN
-GEAWLLNTLITPLMTASTH-VVCEPTRDRKLLLNKKEIDKLIQVTEQKGKACVATALYW-KGNHIKVEIAL
ATGKKDIDKRDTTRDRDWARDKERMMK-HSTR---------------------------
>ZP_01101928|1-163 SsrA-binding protein [gamma proteobacterium KT 71].
-------------------------------------------------------------MAAMGKKKSNT
A-----DT--------------TIVQNKRARFDYHLL-ESFEAGVALTGWEVKALRA-GKAQLTDSYVMMKD
-GEAFLLGSQITPLATASTH-YVTDPTRTRKLLLNRRELARILAAVSAKGQTCVCTKLYW-KGHLVKAAIAL
AHGKQSHDKRQTQKEREWGVQKQRIMR-DAVKQ--------------------------
>ZP_01625148|1-163 SsrA-binding protein [marine gamma proteobacterium HTCC2080].
-------------------------------------------------------------MHPMGKSKKKI
Q-----DN--------------TIAQNKRARFDYHLL-ESYEAGLSLAGWEVKSMRA-GRVQLTDSYVLMKN
-GEAFLFGAQISPLETVSSH-YVTDPTRTRKLLLNKRELAQINAALSQKGQTCVCTALYW-KGHLAKAKISL
AAGKKQHDKRDTEKAKDWDRQKARIVR-DNVKQ--------------------------
>YP_343230|1-189 SsrA-binding protein [Nitrosococcus oceani ATCC 19707].
-------------------------------------------------------------MAKSKKKSSGT
S-----SN--------------VIALNRKARHDYFIE-ERYEAGLVLEGWEVKSLRA-GRVQLNEGYCLLKG
-GEVWLFGVHLSPLNTVSTH-IHPDPLRTRKLLLHAKELRKLIGAVERKGYALIPLTLYW-KRGRVKLEIAL
AKGKQKYDKRATEKEKEWTRQKERLLK-VHKFTRRGLPALAGRGIGILRKFVVFRQKSM
>YP_692025|1-166 ssrA-binding protein [Alcanivorax borkumensis SK2].
-------------------------------------------------------MLYNCRPMGKANKKAKA
P-----SA--------------TIAQNRKARHEYHLE-EHFEAGLVLEGWEVKSLRA-GKGNLTEAYVLLKN
-GEAFLFGARFEPLNTASTH-VNPDPTRTRKLLLHRRELGRVFGGVQKDGFTCVPVSLYW-KKGFAKCDIAL
AKGKQKFDKRATEKERDWNRQKQRVLR-QR-----------------------------
>ZP_01164911|1-157 SsrA-binding protein [Oceanospirillum sp. MED92].
----------------------------------------------------------------MAKKKKAP
S-----GN--------------TICQNKKVRHEYIIE-DKFEAGLSLTGWEVKSLRE-GRAQLVDSYVVIHK
-GEAWLVGAHFTPLKTACTH-VVADPTRDRKLLLHRREIDKIIGATQAKGYTCVALSIYW-KQNHIKCEIAL
AKGKKQHDKRAADKDRDWARQKQRLMA-AK-----------------------------
>ZP_00419561|1-160 SmpB protein [Azotobacter vinelandii AvOP].
---------------------------------------------------------------MAKQKKHPQ
G---------------------NIAQNKKALHDYFIE-QKFEAGLALSGWEVKSLRA-GKAQLVDSYVLLKD
-GEAWLMGSHITPLKTASTH-VIADPTRTRKLLLHKRELGRLFGSVQQKGYACVALSLYW-KKHLIKCEIAL
AKGKKEYDKRDTEKARDSDREIQRAIR-SKGKED-------------------------
>ZP_01524804|1-173 SsrA-binding protein [Pseudomonas mendocina ymp].
--------------------------------------------------MAQAWATPYNARPMAKQKKHPQ
G---------------------TIALNKKALHDYFVE-QKFEAGVALAGWEVKSLRA-GKAQLVDSYVLLKD
-DEAWLMGAHITPLKTASTH-VIADPIRTRKLLLHKRELDKLFGAVQQKGYTCVALSLYW-KQHLVKCEIAL
AKGKKDFDKRHVEKERDANREVQRAMR-SKGKDD-------------------------
>AAT50078|1-160 PA4768 [synthetic construct].
---------------------------------------------------------------MAKQKKHPS
G---------------------TIAQNKKALHDYFIE-QRFEAGVALAGWEVKSLRA-GKAQLVDSYVLLKD
-GEAWLLGSHITPLTTASTH-VIADPVRTRKLLLHKRELGKLFGAVQQKGYACVALSMYW-KKHLVKCEIAL
AKGKKDFDKRHTEKERDSDREIQRAMR-HGKDDG-------------------------
>NP_253456|1-159 SsrA-binding protein [Pseudomonas aeruginosa PAO1].
---------------------------------------------------------------MAKQKKHPS
G---------------------TIAQNKKALHDYFIE-QRFEAGVALAGWEVKSLRA-GKAQLVDSYVLLKD
-GEAWLLGSHITPLTTASTH-VIADPVRTRKLLLHKRELGKLFGAVQQKGYACVALSMYW-KKHLVKCEIAL
AKGKKDFDKRHTEKERDSDREIQRAMR-HGKDD--------------------------
>NP_746841|1-160 SsrA-binding protein [Pseudomonas putida KT2440].
---------------------------------------------------------------MAKQKKHPT
G---------------------TIAQNKKARHDYFIE-HKFEAGLVLSGWEVKSLRA-GKAHLTDSYVLLKD
-GEAWLFGSHITPLTTASTH-VIADPTRTRKLLLNKRELERVEAAVAQKGYTCVALALYW-SKHLIKCEIAL
GKGKKEFDKRDTMRERDSNRELQRAVR-NKGKEE-------------------------
>ZP_01641242|1-160 SsrA-binding protein [Pseudomonas putida W619].
---------------------------------------------------------------MAKQKKHPT
G---------------------TIAQNKKARHDYFIE-HKFEAGLVLSGWEVKSLRA-GKAHLTDSYVLLKD
-GEAWLFGSHITPLTTASTH-VIADPIRSRKLLLNKRELERVEAAVAQKGYTCVALALYW-SKHLIKCEIAL
GKGKKEFDKRDTVRERDSNRELQRAVR-NKGKED-------------------------
>YP_606503|1-160 ssrA-binding protein [Pseudomonas entomophila L48].
---------------------------------------------------------------MAKQKKHPT
G---------------------TIAQNKKARHDYFIE-HKFEAGLVLSGWEVKSLRA-GKAHLTDSYVLLKD
-GEAWLFGSHITPLTTASTH-VIADPIRTRKLLLNKRELERLEAAVAQKGYTCVAMSLYW-SKHLIKCEIAL
GKGKKEFDKRDTVRERDSNRELQRTMR-NKGKEE-------------------------
>NP_794268|1-160 SsrA-binding protein [Pseudomonas syringae pv. tomato str. DC3000].
---------------------------------------------------------------MAKLKKHPT
G---------------------TIAQNKKARHDYFIE-HKFEAGLVLSGWEVKSLRA-TKVQLVDSYVLLKD
-GEAWLMGCHITPLKTASTH-VIADPTRTRKLLLNQRELEKLTSSVQQKGYACVALSIYW-KQHLIKCEIAL
GKGKKEYDKRHTERERDSDRELQRAVR-TKGKDD-------------------------
>YP_276334|1-160 SsrA-binding protein [Pseudomonas syringae pv. phaseolicola 1448A].
---------------------------------------------------------------MAKLKKNPT
G---------------------TIAQNKKARHDYFIE-HKFEAGLVLAGWEVKSLRA-TKVQLVDSYVLLKD
-GEAWLMGCHITPLKTASTH-VIADPTRTRKLLLNKRELEKLTSSVQQKGYACVALSVYW-KEHLIKCEIAL
GKGKKEYDKRHTERERDSDRELQRAVR-SKGKDD-------------------------
>YP_237271|1-160 SsrA-binding protein [Pseudomonas syringae pv. syringae B728a].
-----------------------------------------------------------------MAKLKKH
P-----TG--------------TIAQNKKARHDYFIE-HKFEAGLVLSGWEVKSLRA-TKVQLVDSYVLLKD
-GEAWLMGCHITPLKTASTH-VIADPTRTRKLLLNKRELEKLTSSVQQKGYACVALSVYW-KEHLVKCEIAL
GKGKKEYDKRHTERERDSDRELQRAVR-SKGKDD-------------------------
>YP_257954|1-160 SsrA-binding protein [Pseudomonas fluorescens Pf-5].
---------------------------------------------------------------MAKQKKHPT
G---------------------TIAQNKKARHDYFIE-HRFEAGMVLAGWEVKSLRA-GKAQLVDSYVLLKD
-GEAWLLGSHFTPLTTASTH-VIADPTRSRKLLLNQRELEKLFAAVQQKGYACVCLSLYW-SKHLVKCEIAL
GKGKKEYDKRHTERERDSDRELQRAVR-TKGKED-------------------------
>YP_346487|1-160 SsrA-binding protein [Pseudomonas fluorescens PfO-1].
---------------------------------------------------------------MAKQKKHPT
G---------------------TIAQNKKARHDYFIE-HKFEAGLVLAGWEVKSLRA-SKLQLVDSYVLLKD
-GEAWLLGSHITPLMTASTH-VIADPVRTRKLLLNRRELDKLAAAVQQKGYACVCLSWYW-SKHMVKCEIAL
GKGKKEYDKRDTERERDAGRELQRAVR-NKGKED-------------------------
>YP_575144|1-157 SsrA-binding protein [Chromohalobacter salexigens DSM 3043].
----------------------------------------------------------------MAKKKGNL
G-----SS--------------TIAQNKKARFEYHID-ETFEAGLSLAGWEVKSLRA-GKAQLTDTYILIKN
-GEAWLLGSHITPLNTVSTH-VVADPSRTRKLLLHRKEIAKIFSRTQDKGHTCVPLKLYW-KKNLVKCELAL
VRGKKLHDKRATEKARDWNREKARIMR-AH-----------------------------
>YP_960628|1-160 SsrA-binding protein [Marinobacter aquaeolei VT8].
---------------------------------------------------------------MSKKKANAP
T-----SN--------------TIALNKKAKHEYHIE-ERFEAGLALLGWEVKSLRA-GKAQLVDAYVLLKD
-GEAWLLGSHITPLNTASTH-VIADPTRTRKLLLHAKEIAKIVGQVNQAGYTCIPLALYW-KKNKVKCEIAL
VKGKKLFDKRATEKERDWNRQKQRIMR-EANT---------------------------
>YP_432513|1-160 SsrA-binding protein [Hahella chejuensis KCTC 2396].
----------------------------------------------------------------MSQAKNKN
T-----GS--------------TIALNKKARFDYHIV-EKFEAGLALTGWEVKSLRA-GKCQLVDSYVLLKD
-SEAWLLGAHITPLKEASTH-VIADPTRTRKLLLHRRELNKLIGAVSQTGHTCVPLALYW-KGNKVKCEIAL
VKGKKDFDKRETEKERDWNRQKQRVIR-DHVKQ--------------------------
>ZP_01224888|1-158 SmpB protein [marine gamma proteobacterium HTCC2207].
----------------------------------------------------------------MTKKKPKA
Q-----SS--------------TIALNKKAKHNYFLE-QKFEAGIALMGWEVKSLRE-GKVNLTDTYVLLQN
-GEAWLIGTNITPLPTASTH-YVTEPIRSRKLLLNRRELDKLEAGVNQKGHTCVCTAMYW-KSHLIKVEIAL
AKGKADFDKRNDDKERDWDRQKQRIMR-HSA----------------------------
>ZP_01618578|1-158 SsrA-binding protein [marine gamma proteobacterium HTCC2143].
----------------------------------------------------------------MAKKKPKQ
T-----SN--------------TIAQNKKARHDYHLT-EKFEAGLVLHGWEVKSLRM-GKVQITDTYVLIKN
-GEAFLIGTHITPLNTASTH-FIADPTRTRKLLLNKREIAKLLVATTQEGHTCVCTALYW-KNHIVKAEICI
AKGKQQHDKRETEKERDWNKQKSRVMR-HTA----------------------------
>ZP_01127001|1-163 SsrA-binding protein [Nitrococcus mobilis Nb-231].
-----------------------------------------------------------MRVSKQNPKSKAG
N-----SP--------------NISVNRRARHDYHIE-DTFEAGLVLEGWEVKALRA-GRGSLQESYVIIKD
-GEAWLIGCNISPLPTASTH-IQPDPIRTRKLLLHERELSRLIGATEQRGYTLVPLNMHW-KRGRAKLDLAL
AKGKKKFDKRAAQKEHDWQREKQRLLK-HRQ----------------------------
>YP_001003054|1-165 SsrA-binding protein [Halorhodospira halophila SL1].
----------------------------------------------------------MRPVSKKAGKSKKT
E-----GN--------------VIALNRKAGFDFFVE-ERLEAGLALEGWEVKALRA-KRVNLTESHVLVRR
-GEAWLIGCNITPLSTASTH-IHPDPTRTRKLLLHRREINRLIGAVDRDGYTVVPLKLYW-KRGRAKIEIGV
AKGKKKQDKRADKKEQDWQRQRERLLK-HKVS---------------------------
>YP_742743|1-160 SsrA-binding protein [Alkalilimnicola ehrlichei MLHE-1].
--------------------------------------------------------------MRAVSKKKKT
P-----EN--------------VIALNRKARFEFHIE-ETMEAGLALEGWEVKSLRA-GRVNLQEAYVLIRR
-GEAWLIGCTITPLPTASTH-IKPDPTRTRRLLLHKKEIARLTGAADREGYTVVPLDLHW-KRGKAKLSIGL
AKGKKKHDKRADQKEQDWQRQKQRLMK-HKV----------------------------
>ZP_00241836|1-155 COG0691: tmRNA-binding protein [Rubrivivax gelatinosus PM1].
------------------------------------------------------------------------
-------M--------------AIADNKKARFNYTIE-EQFEAGMVLEGWEVKAIRA-GQVQLTDGYVVVKD
-GELFLIGCRINPLRTASTH-VHPQADRTKKLLMKKDEIRRLVGKVEQKGYTLVPLNLHY-KGGRVKADIAL
AKGKDLHDKRETEKKRDWEREKGQLMR-HKISSPRKDT---------------------
>YP_986786|1-157 SsrA-binding protein [Acidovorax sp. JS42].
------------------------------------------------------------------MAKKPD
T-----SS--------------RIADNKKAAYNYFFE-ERYEAGLVLHGWEVKALRE-GKVQLTDGYVIIKD
-GELFLIGCQINPLKTASTH-VSPDAARIKKLLMHKDEIRRLIGKVEQKGYTLVPLNLHW-KDGRAKCEIAL
AKGKAEHDKRDTIKEREGKREVERVMK-SRHR---------------------------
>YP_549253|1-149 SsrA-binding protein [Polaromonas sp. JS666].
------------------------------------------------------------------------
------MR---------------IADNKKAIFNYHIE-ERFEAGMVLEGWEVKSVRE-GKVQLTDGYVVIRG
-GELFIIGCQINPLGTASTH-VRPDSVRTKKLLMHKDEIRRLVGKVEQKGFTLVPLNMHW-KAGKVKCEIGL
AKGKGEHDKRDTIKDREGKREVERAMK-SRSR---------------------------
>YP_115024|1-157 SsrA-binding protein [Methylococcus capsulatus str. Bath].
----------------------------------------------------------------MSSKKSAP
G-----SA--------------NIAQNRQATHEYFIE-ERLEAGLVLEGWEVKSLRA-GKAQLKESFVMLKN
-GEAWLFGAHFSPLPSASTH-VQPDPTRSRKLLLHAEELSRLIGQVERKGYTLVPLSLYW-KQGRAKLEIGL
ARGKKQHDKRAAEKERDWEREKQRVMR-RG-----------------------------
>CAJ49364|1-153 SsrA-binding protein [Bordetella avium 197N].
------------------------------------------------------------------------
-------M--------------SIIDNRKASHDYFIE-DRYEAGLVLQGWEVKSIRA-GRVQLKESYVIVRD
-GELFLLGMHVSPLPTASTH-IHPDAMRTRKLLLKAEEIHKLIGKVEQRGFTLVPLNLHY-KNGRVKLDFAL
GRGKKLYDKRDTSREKDWLRERERVMK-HDTRRRSD-----------------------
>NP_880184|1-155 SsrA-binding protein [Bordetella pertussis Tohama I].
------------------------------------------------------------------------
-------M--------------SIIDNRKATHDYFIE-DRYEAGMVLEGWEVKAIRD-GRVQLKESYVIVRD
-GEIYLLGMHVSPLPTASTH-IRPDATRTRKLLLKAEEIRKLIGKVEQRGYTLVPLNLHY-KNGRIKLDFAL
GRGKKLYDKRDTAREKDWQREKERVLK-HDTRVNQRDS---------------------
>NP_883836|1-155 SsrA-binding protein [Bordetella parapertussis 12822].
------------------------------------------------------------------------
-------M--------------SIIDNRKATHDYFIE-DRYEAGMVLEGWEVKAIRD-GRVHLKESYVIVRD
-GEIYLLGMHVSPLPTASTH-IRPDATRTRKLLLKAEEIRKLIGKVEQRGYTLVPLNLHY-KNGRIKLDFAL
GRGKKLYDKRDTAREKDWQREKERVLK-HDTRVNQRDS---------------------
>NP_903134|1-151 SsrA-binding protein [Chromobacterium violaceum ATCC 12472].
------------------------------------------------------------------------
-------M--------------SIIQNRKAFHDYFIE-EKLEAGLVLEGWEVKAIRA-GRVQLKESYVDWKN
-GAFWLIGCHITPLQSASTH-VKPDPVRPRKLLMSQAEINRFIGKVERAGYTMMALDLHY-TKGNVKAEVGL
AKGKKLHDKRDTEKDREWQREKQRVMK-NQRGAA-------------------------
>AAC44080|1-148 orf1; hypothetical protein, similar to Escherichia coli SmpB, small major protein B, Swiss-Prot Accession Number P32052, and to Streptococcus faecalis ATPase A, encoded by GenBank Accession Number M90060.
------------------------------------------------------------------------
-------M--------------AIANNKKAFHDFFIE-DRIEAGLVLEGWEVKAIRA-ALSMLKESYMYWKK
-DAFYLVGCHITALPTASTH-IKPDAVRRASFLLNQSEINKLNGKTERAGYTTVPLGFAF-SRGKIKMEIGL
AKGKKQHDKRQSMKEADWKREKQRLIK-HTR----------------------------
>NP_274533|1-148 SsrA-binding protein [Neisseria meningitidis MC58].
------------------------------------------------------------------------
-------M--------------AIANNKKAFHDFFIE-DRIEAGLVLEGWEVKAIRA-ARVQLKESYIYWKK
-DAFYLVGCHITALPTASTH-IKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHF-SRGKIKMEIGL
AKGKKQHDKRQSMKEADWKREKQRLIK-HTR----------------------------
>YP_208083|1-150 SsrA-binding protein [Neisseria gonorrhoeae FA 1090].
------------------------------------------------------------------------
M-----FM--------------AIANNKKAFHDFFIE-DRIEAGLVLEGWEVKAIRA-ARVQLKESYIYWKK
-DAFYLVGCHITALPTASTH-IKPDAVRPRKLLLKQSEINKLIGKTERAGYTIVPLDLHF-SRGKIKMEIGL
AKGKKQHDKRQSMKEADWKREKQRLIK-HTR----------------------------
>NP_284441|1-150 SsrA-binding protein [Neisseria meningitidis Z2491].
------------------------------------------------------------------------
M-----FM--------------AIANNKKAFHDFFIE-DRIEAGLVLEGWEVKAIRA-ARVQLKESYIYWKK
-DAFYLVGCHITALPTASTH-IKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVPLDLHF-SRGKIKMEIGL
AKGKKQHDKRQSMKEADWKREKQRLIK-HTR----------------------------
>YP_285548|1-149 SmpB protein [Dechloromonas aromatica RCB].
------------------------------------------------------------------------
-------M--------------SITVNKKAFHDYFVE-EKYEAGISLEGWEVKAIRA-GRMNIKESYVIIKG
-GELFLIGMHISPLATASTH-VSHDPTRTRKLLLHAKEISKLIGKVERAGYALVPLDLHF-VRGRIKLEIGL
AKGKKQHDKRADELDKDSKREAQRAMK-ERQR---------------------------
>ZP_01552007|1-151 SsrA-binding protein [Methylophilales bacterium HTCC2181].
------------------------------------------------------------------------
-------M--------------SIVQNKKAFHDYFIE-AKYEAGIVLEGWEVKAIRD-NRAHIKEAYVIIQR
-GEIYLLGCHITPMGNASTH-INPENVRTRKLLLNNDEIAKLIGKVERSGYTLVPLDLHY-KKGFIKCEIGL
AKGKKQYDKRAVEKEKDWNRDKTRIIR-AVNKGK-------------------------
>YP_442573|1-148 SsrA-binding protein [Burkholderia thailandensis E264].
------------------------------------------------------------------------
-------M--------------SIIDNRKAFFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVVKN
-AEIFLIGTHISPLPEASTH-IKPDPVRTRKLLLHRDEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCEIGL
AKGKKLHDKRETEKKRDWEREKARIMR-SAT----------------------------
>ZP_01347019|1-148 hypothetical protein Bmal10_03000329 [Burkholderia mallei 10399].
------------------------------------------------------------------------
-------M--------------SIIDNRKAFFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVVKH
-AEIFLIGTHISPLPKASTH-IKPDPVRTRKLLLHRDEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCEIGL
AKGKKLHDKRETEKKRDWEREKARIMR-SAT----------------------------
>YP_108732|1-148 SsrA-binding protein [Burkholderia pseudomallei K96243].
------------------------------------------------------------------------
-------M--------------SIIDNRKAFFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVVKH
-AEIFLIGTHISPLPEASTH-IKPDPVRTRKLLLHRDEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCEIGL
AKGKKLHDKRETEKKRDWEREKARIMR-SAT----------------------------
>YP_369547|1-148 SsrA-binding protein [Burkholderia sp. 383].
------------------------------------------------------------------------
-------M--------------SIIDNRKAHFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIREGYVVIKH
-DEIFLIGTHISPLPEASTH-ITPDPVRTRKLLLHREEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCDIAL
AKGKKLHDKRETEKKRDWEREKARIMR-AGT----------------------------
>YP_773922|1-148 SsrA-binding protein [Burkholderia cepacia AMMD].
------------------------------------------------------------------------
-------M--------------SIIDNRKAHFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVVKN
-AEIFLIGTHISPLPEASTH-IHPDPVRTRKLLLHREEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCDIAL
AKGKKLHDKRETEKKRHWEREKARIMR-AGT----------------------------
>ZP_00427103|1-148 SmpB protein [Burkholderia vietnamiensis G4].
------------------------------------------------------------------------
-------M--------------SIIDNRKAHFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVVKN
-AEIFLIGTHISPLPEASTH-IKPDPVRTRKLLLHREEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCDIAL
AKGKKLHDKRETEKKRDWEREKARIMR-AGT----------------------------
>ZP_01557403|1-148 SsrA-binding protein [Burkholderia ambifaria MC40-6].
------------------------------------------------------------------------
-------M--------------SIIDNRKAHFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVVKN
-AEIFLIGTHISPLPEASTH-IHPDPVRTRKLLLHRDEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCDIAL
AKGKKLHDKRETEKKRDWEREKARIMR-AGT----------------------------
>ZP_00986794|1-148 COG0691: tmRNA-binding protein [Burkholderia dolosa AUO158].
------------------------------------------------------------------------
-------M--------------SIIDNRKAHFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVIKN
-AEIFLIGTHISPLPEASTH-IKPDPVRTRKLLLHRDEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCDIAL
AKGKKLHDKRETEKKRDWEREKARILR-AGT----------------------------
>ZP_01572089|1-148 SsrA-binding protein [Burkholderia multivorans ATCC 17616].
------------------------------------------------------------------------
-------M--------------SIIDNRKAHFDYHIE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVIKN
-AEIFLIGTHISPLPEASTH-IKPDPVRTRKLLLHRDEIKKLIGKVEQRGYTLVPLNFHY-KGGRVKCDIAL
AKGKKLHDKRETEKKRDWEREKARIMR-AGA----------------------------
>ZP_01504118|1-148 SsrA-binding protein [Burkholderia phymatum STM815].
------------------------------------------------------------------------
-------M--------------SIIDNRKAFFDYSVE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVIKN
-AELYLIGTHISPLPEASKF-ANLDPVRTRKLLLHAEEISKLIGKVEQRGYTLVPLNFHY-KNGRVKCEIGL
AKGKKLHDKRETEKKRDWEREKARLMR-TPT----------------------------
>ZP_01509141|1-148 SsrA-binding protein [Burkholderia phytofirmans PsJN].
------------------------------------------------------------------------
-------M--------------SIIDNRKAFYDYSVE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVIKN
-NELFLIGTHISPLPEASTH-INPDPVRTRKLLLHSEEISKLIGKVEQRGYTLVPLNFHY-KGGRVKCEIGL
AKGKKQHDKRETEKKRDWEREKARLMR-SPT----------------------------
>YP_559305|1-148 SmpB protein [Burkholderia xenovorans LB400].
------------------------------------------------------------------------
-------M--------------SIIDNRKAFYDYSVE-ERYEAGLVLEGWEVKALRA-GRGQIKEGYVVIKN
-NELFLIGTHISPLPEASTH-INPDPVRTRKLLLHSEEISKLIGKVEQRGYTLVPLNFHY-KGGRVKCEIGL
AKGKKQHDKRETEKKRDWEREKARLMR-SPG----------------------------
>NP_519545|1-148 SsrA-binding protein [Ralstonia solanacearum GMI1000].
------------------------------------------------------------------------
-------M--------------TIADNKKAFFDYFVE-ERYEAGIALEGWEVKAIRA-GRVQIKEGYVVIRD
-AELFLIGAHISPLQSASTH-VKPDPTRTRKLLLHAEEIKKLIGKVEQRGYTLVPLNLHY-ARGRVKCEIGL
AKGKKLYDKRETEKDRDWQREKARLMR-EKA----------------------------
>ZP_00946911|1-148 SsrA-binding protein [Ralstonia solanacearum UW551].
------------------------------------------------------------------------
-------M--------------TIAENKKAFFDYFIE-ERYEAGIALEGWEVKAIRA-NRVQIKEGYVVIRD
-AELFLIGAHISPLQSASTH-VKPDPTRTRKLLLHAEEIKKLIGKVEQRGYTLVPLNLHY-ARGRVKCEIGL
AKGKKLYDKRETEKDRDWQREKARLMR-EKA----------------------------
>YP_296070|1-150 SsrA-binding protein [Ralstonia eutropha JMP134].
------------------------------------------------------------------------
-------M--------------TIADNKKAFFDYFIE-ERFEAGIVLEGWEVKAIRA-GRVQIKEGYVVVRD
-AEMFLIGAHISPLQSASTH-VNPDPVRTRKLLLKADEIKKLIGKVEQRGYTLVPLNLHY-TRGRVKCEIGL
GKGKKLFDKRETEKQRDWQREKSRIMK-GGSKE--------------------------
>YP_726503|1-150 tmRNA-binding protein small potein B [Ralstonia eutropha H16].
------------------------------------------------------------------------
-------M--------------TIADNKKAFFDYFIE-ERYEAGIVLEGWEVKAIRA-GRVQIKEGYVVVRD
-AEMFLIGAHISPLQSASTH-VNPDPVRTRKLLLKADEIKKLIGKVEQRGYTLVPLNLHY-TRGRVKCEIGL
AKGKKQFDKRETEKQRDWQREKARIMK-GDAKD--------------------------
>YP_583608|1-150 SsrA-binding protein [Ralstonia metallidurans CH34].
------------------------------------------------------------------------
-------M--------------TIADNKKAFFDYFIE-ERYEAGIVLEGWEVKAIRA-GRVQIKEGYVVVRD
-AEMFLIGAHISPLQSASTH-INPDPVRTRKLLLKADEIKKLIGKVEQRGYTLVPLNLHY-TRGRVKCEIGL
AKGKKQFDKRETEKNRDWDREKARIMK-GGVKE--------------------------
>YP_545254|1-154 SsrA-binding protein [Methylobacillus flagellatus KT].
------------------------------------------------------------------------
-------M--------------SIAQNKKAFHDYFIE-EKYEAGIVLEGWEVKAIRE-NRVQLKEAYVIIQR
-GEIYLIGCHVTPLGSASTH-VRPDAIRTRKLLLHSEQIAKLIGKVERAGYTLVPLDMHY-TRGRIKVQIGL
AKGKKQYDKRHSEKEKDWKREQSSLMK-KYVKTQAGS----------------------
>YP_160825|1-148 SsrA-binding protein [Azoarcus sp. EbN1].
------------------------------------------------------------------------
-------M--------------SIIDNRKAFHDYFIE-ETYEAGLVLEGWEVKAIRA-GRANIKEAYVILRG
-EELFILGMHISALQSASTH-VETDPVRTRKLLMHAKEIAKLIGKVERAGFTLVPLDLHY-AKGRIKATIGL
AKGKKQYDKRESEKERDWERDKARLMR-VKT----------------------------
>YP_933080|1-148 probable SsrA-binding protein [Azoarcus sp. BH72].
------------------------------------------------------------------------
-------M--------------SIIDNRKAYHDYFIE-EKYEAGLVLEGWEVKAIRA-GRANIKEAYIIVRG
-EEIFILGMHITPLASASTH-IRTDPTRTRKLLLHGAEIARLIGKVERAGFTLVPLDLHY-AKGRVKAEIGL
AKGKKQYDKREDEKKRDWEREKQRLMR-VKA----------------------------
>YP_315514|1-149 SsrA-binding protein [Thiobacillus denitrificans ATCC 25259].
------------------------------------------------------------------------
-------M--------------SIADNKKAFHDYFIE-ERFEAGLVLEGWEVKAIRA-GRVQLKEAYVVVKN
-GAVYLIGCHISPLPTASTH-IHPDPTRSRKLLLHAAEINKLIGKTERAGFTLVPLDMHY-SKGRIKLEIGL
AKGKKQHDKRAAEKDREWQREKQRLVR-SAQH---------------------------
>YP_411898|1-147 SsrA-binding protein [Nitrosospira multiformis ATCC 25196].
------------------------------------------------------------------------
-------M--------------SIVQNKKAFHDYFIE-EKHEAGAVLEGWEVKAIRA-GRAQLKEAYVIIRN
-GELFLIGCHVSPLLAASTH-IQPDPVRTRKLLLHAEEIKRLIGKVERAGYTLVPLDIHY-KKGRIKLEIGL
AKGKKQHDKRESEKQKEWERDKQRLMR-PK-----------------------------
>YP_746824|1-149 SsrA-binding protein [Nitrosomonas eutropha C91].
------------------------------------------------------------------------
-------M--------------SIAQNKKAFHDYFIE-EKYEAGIVLEGWEVKAIRA-GRVQLKEAYIVIRR
-GELFLIGCHISPLPTASTH-VNPDPVKTRKLLLHAFQIKELIGKVERAGYTLVPLDMHY-KAGKIKLEIGL
AKGKKQYDKRESEKRKEWERDKQRLLR-MRHS---------------------------
>NP_840517|1-151 SsrA-binding protein [Nitrosomonas europaea ATCC 19718].
------------------------------------------------------------------------
-------M--------------SIVQNKKAFHDYFIE-EKYEAGIVLEGWEVKAIRA-GRAQLKEAYILIRK
-GELFLIGSHISPLATASTH-VNPDPVKTRKLLLHASQIRELIGKVERAGYTLIPLDMHY-KSGRIKLEIGL
ARGKKQYDKRETEKRKEWERDKQRLLR-IRRSSD-------------------------
>YP_096834|1-156 SsrA (tmRNA) binding protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1].
------------------------------------------------------------------MTTKKQ
P-----DS--------------TIALNRKAGFDYFIE-DQYEAGLVLEGWEVKSLRA-GKINLSDSHVIIKY
-GEAFLLGAQIQPLPTASTH-FIPDPIRTRKLLMNKKELNHLIGSVERQGYTIVPLSLYW-KKNKIKIKIAL
AKGKKEHDKRDTIKDREWQRDRSRIMK-KNT----------------------------
>YP_128078|1-156 SsrA-binding protein [Legionella pneumophila str. Lens].
------------------------------------------------------------------MTTKKQ
P-----DS--------------TIALNRKAGFDYFIE-DQYEAGLVLEGWEVKSLRA-GKINLSDSHVIIKY
-GEAFLLGAQIQPLPTASTH-FIPDPVRTRKLLMNKKELNHLIGSVERQGYTIVPLSLYW-KKNKIKIKIAL
AKGKKEHDKRDTIKDREWQRDRSRIMK-KNT----------------------------
>YP_661314|1-158 SsrA-binding protein [Pseudoalteromonas atlantica T6c].
----------------------------------------------------------------MKSKKSKS
T-----NN--------------TIALNKKARHDYILQ-DKIEAGIELQGWEVKSIRS-GKVNLSDSYVTLHK
-GEAFLVGSTIQPLNQASSH-VVCEPLRQRKLLLNKRELDKLIGSVERQGYSILATAMYW-KKNWVKVEIYL
GKGKHEHDKRDAVKDRDWARDKERMMK-HKV----------------------------
>ZP_01450122|1-158 SsrA-binding protein [alpha proteobacterium HTCC2255].
----------------------------------------------------------------MSKKKSKN
P-----TG--------------TIALNKKAKHEFHLT-DKFEAGMELQGWEVKSIRA-GKVNLSDSYVFVKN
-GEAFVTNITIQPLSQASTH-VICDPDRTRKLLLKRREIEQLMGGLDRQGLTIVATAMYW-KACWVKLEICL
AKGKQAHDKRDTIKDRDWARQKERMMK-VKG----------------------------
>ZP_01135105|1-159 SsrA-binding protein [Pseudoalteromonas tunicata D2].
----------------------------------------------------------------MANKKSKP
G-----SN--------------TIALNKKARHEYSLG-DKFEAGLELQGWEVKSIRA-GKVNISDTYIHLKN
-GEAFLLGSQIQPLNSASTH-VICDPYRYRKLLLKKREIDRLVGSTERDGFTLVATAMYW-KQCWVKLEFHL
AKGKKLHDKREDGKEKDWAREKERTMK-HSAR---------------------------
>ZP_01613999|1-159 SsrA-binding protein [Alteromonadales bacterium TW-7].
---------------------------------------------------------------MAKKNSSKS
T-----SN--------------TIALNKKARHEYFLH-DKFEAGVELQGWEVKSIRA-GKVNISETYIHLKN
-GEAFLLGSQIQPLNSASTH-VICDPMRYRKLLLSRRELDRLVGATERDGYSLVATAMYW-KKCWVKLEFHL
AKGKKMHDKREDGKNKDWSREKERLMK-HKV----------------------------
>YP_339365|1-159 SsrA-binding protein [Pseudoalteromonas haloplanktis TAC125].
---------------------------------------------------------------MAKNKSSKS
T-----SN--------------TIALNKKARHEYFLH-DKFEAGVELQGWEVKSIRA-GKVNITETYIHLKN
-GEAFLLGAQIQPLNSASTH-VICDPLRYRKLLLSRRELDRLVGATERDGYSLIATAMYW-KNCWVKLEFHL
AKGKKLHDKREDGKDKDWSREKERLMK-HKA----------------------------
>ZP_01111003|1-159 SsrA-binding protein [Alteromonas macleodii 'Deep ecotype'].
---------------------------------------------------------------MKKNKANKN
T-----SG--------------NIAQNKKARHDYFLE-DKFEAGLELQGWEIKSIRA-GKVNITDAYIIIQN
-AEAYLVGCRISPLNQASTH-VVAAPERARKLLLKKREIDRLMGARDRQGYSIVATSMYW-KKCWVKLEIHL
AKGKHAHDKRDTLKDKDWQRQKERMMK-HSV----------------------------
>YP_155287|1-159 SsrA-binding protein [Idiomarina loihiensis L2TR].
----------------------------------------------------------------MSKKKPQQ
S-----SN--------------TIARNKKARHEYFLE-DKFEAGVSLQGWEIKSIRA-GKVNISDSYVIIKN
-GEAYLLGAEIQPLNQASSH-VYCEPDRSRKLLLKRRELDKLIGASEREGYSIVATTIYW-KGPWAKLEIFL
AQGKKSHDKRDTIKERDWQRQKARIMK-HSVR---------------------------
>ZP_01043029|1-159 SmpB [Idiomarina baltica OS145].
----------------------------------------------------------------MSKKKSQT
N-----SS--------------TIALNKKARHEYFLE-EKFEAGISLQGWEVKSIRE-GKVNIRDSYVIMKN
-GEAYLLGAEIQPLTQASSH-VYCEPDRSRKLLLKKKELDKLIGASEREGFAVVATAMYW-KHCWVKLECYL
AKGKKSHDKRDTVKERDWQRQKSRILK-HSVR---------------------------
>ZP_00836767|1-163 SmpB protein [Shewanella sp. PV-4].
-------------------------------------------------------------MAKKNAKKSKN
P-----PA--------------TIARNKRANFDYKFE-EKFEAGLSLMGWEVKSIRV-GKVNLSESYVFLRD
-GEAYLFGCTITPLNTASTH-VVCDPMRDRKLLLNRRELDKLQGLVERQGYSIVPISMYWRKNAWVKLEIGL
GKGKKEHDKRDDTKEREWKIEKSRTMK-HAAR---------------------------
>ZP_01539873|1-164 SsrA-binding protein [Shewanella woodyi ATCC 51908].
-------------------------------------------------------------MAKKNAKKSKN
S-----SA--------------SIARNKRATFDYKFE-EKMEAGLSLMGWEVKSIRM-GKVNLSESYVFMRE
-GEAFLFGCTIAPLNTASTH-VVCDPMRSRKLLLKRKELDKLQGLVDRKGYSIVPISMYWQKGAWVKIEIGL
GKGKKEHDKRDDTKDREWQIEKARTMK-KAVQQ--------------------------
>ZP_01601819|1-164 SsrA-binding protein [Shewanella pealeana ATCC 700345].
-------------------------------------------------------------MAKKNAKNSKN
S-----SA--------------SIARNKRATFDYKFE-EKLEAGLSLMGWEVKSIRM-GKVNLSESYVFLRE
-GEAYLFGCTIAPLNTASSH-VVCDPLRSRKLLLKRKELDKLQGLVDRKGYSIVPISMYWQKGAWVKIEIGL
GKGKKEHDKRDDTKDREWQIEKARTIK-KAVQQ--------------------------
>YP_928262|1-160 SsrA-binding protein [Shewanella amazonensis SB2B].
------------------------------------------------------------MVKKNSKKAAQP
A---------------------TIARNKRATFEYKFD-EKFEAGLSLMGWEVKSIRA-GKINISESYVMLKN
-GEAFLHHCHITPLHAASTH-VVCDPTRPRKLLLNRRELDRLAGLVERQGYAIVPISMYWRKGAWVKVEIGL
GKGKKAHDKRDDIKQRDWDIEKARVMK-NK-----------------------------
>NP_717089|1-163 SsrA-binding protein [Shewanella oneidensis MR-1].
---------------------------------------------------------------MVKKNSKKA
A-----PA--------------TIARNKRATFEYRFE-EKMEAGLSLMGWEVKSIRM-GKVNLSDCYVFLKN
-GEAFMHGCTIIPLNTASTH-VVCDPIRLKKLLLSRKELDKLAGLVERQGYSIIPISMYWRKGAWVKVEIGL
GKGKKDHDKREDTKAREWEVEKARVMK-KEKTRG-------------------------
>YP_734904|1-163 SsrA-binding protein [Shewanella sp. MR-4].
---------------------------------------------------------------MVKKNSKKA
A-----PA--------------TIARNKRATFEYRFE-EKMEAGISLMGWEVKSIRM-GKVNLSDCYVFLKN
-GEAFMHGCTIIPLNTASTH-VVCDPIRLKKLLLSRKELDKLAGLVERQGYSIIPISMYWRKGAWVKVEIGL
GKGKKDHDKREDTKAREWEVEKARVMK-KEKTRG-------------------------
>ZP_00582368|1-163 SmpB protein [Shewanella baltica OS155].
---------------------------------------------------------------MVKKNSSKA
A-----PA--------------TIARNKRATFEYRFE-EKMEAGLSLMGWEVKSIRM-GKVNLSDCYVFLKN
-GEAFMHGCTIIPLNTASTH-VVCDPLRLKKLLLSRKELDKLAGLVERQGYSIIPISMYWRKGAWVKVEIGL
GKGKKDHDKREDTKAREWEVEKARVMK-KEKTHG-------------------------
>ZP_00813520|1-163 SmpB protein [Shewanella putrefaciens CN-32].
---------------------------------------------------------------MVKKKSSKA
A-----PA--------------TIARNKRATFEYRFE-EKMEAGLSLMGWEVKSIRM-GKVNLSDCYVFLKN
-GEAFMHGCTIIPLNTASTH-VVCDPLRLKKLLLSRKELDKLAGLVERQGYSIIPISMYWRKGAWVKVEIGL
GKGKKDHDKREDTKAREWEVEKARVMK-KEKTHG-------------------------
>YP_562248|1-186 SsrA-binding protein [Shewanella denitrificans OS217].
----------------------------------------MTTLPFDRKWLQRIHIKTVKRMVKKNSKSAKN
A-----SA--------------TIARNKRATFEYRIE-DKIEAGLQLMGWEVKSIRM-GKVNLSDCYVYIKE
-GEAFMHGCTIQPLNTASTH-VVCDPIRTKKLLLKRSEIDKLAGLIERQGYTLIPLSMYWRKGAWVKVEIGL
GKGKKDHDKREDTKEREWKIEKARVMK-KDKVGA-------------------------
>YP_749785|1-162 SsrA-binding protein [Shewanella frigidimarina NCIMB 400].
----------------------------------------------------------------MVKKKSAN
A-----SA--------------SIARNKRATFEYRIE-DKIEAGLQLMGWEVKSIRM-GKVNLSDCYVYIKE
-GEAFMHGCTIQPLNTASTH-VICDPIRTKKLLLKRSEIDKLAGLIERQGYTLVPLSMYWRKGAWVKVEIGL
GKGKKDHDKREDTKEREWKIEKARVMK-KDKENA-------------------------
>YP_455484|1-160 small protein B [Sodalis glossinidius str. 'morsitans'].
---------------------------------------------------------------MTKKKEHKP
G-----SA--------------TIAQNKRARHEYFIE-QEFEAGLSLQGWEVKSLRA-GKANIGDSYVLLKD
-GEAYLFGATFQPLTVASSH-VVCDPMRTRKLLLNKRELDSLFGRVNREGYTVVALSLYW-KNAWVKVKIGV
AKGKKEYDKRTDIKEREWQLDKSRIMK-HASR---------------------------
>NP_930596|1-160 SsrA-binding protein [Photorhabdus luminescens subsp. laumondii TTO1].
---------------------------------------------------------------MTKKKAHKP
G-----SA--------------TIAMNRRARHEYFIE-EEFEAGLSLQGWEVKSLRA-GKANISDSYVLLKD
-GDAYLFGATITPLNVASSH-VVCDPMRSRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVRIGV
AKGKKAHDKRSDIKEREWKLDKARIMK-NAGR---------------------------
>ZP_01591212|1-168 SsrA-binding protein [Enterobacter sp. 638].
-------------------------------------------------------MTYGFTTLMTKKKVHKP
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLSLQGWEVKSLRA-GKANISDSYVILID
-GEAFLFGANFTPLAVASSH-YVCDPIRTRKLLLNQRELESLFGRINREGYTVVALSLYW-KNAWCKVKIGV
AKGKKQHDKRSDLKDREWQVDKARIMK-HAGR---------------------------
>YP_217675|1-175 SsrA-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67].
------------------------------------------------MGCFRYQITYEFTTLMTKKKAHKP
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANIGDSYVILKD
-GEAWLFGANFTPMAVASTH-VVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYW-KNAWCKVKIGV
AKGKKQHDKRSDLKEREWQLDKARIMK-NAGR---------------------------
>NP_457157|1-160 SsrA-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18].
---------------------------------------------------------------MTKKKAHKP
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANIGDSYVILKD
-GEAWLFGANFTPMAVASTH-VVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYW-KNAWCKVKIGV
AKGKKQHDKRSDLKEREWQLDKARIMK-NAGR---------------------------
>ZP_00735667|1-160 COG0691: tmRNA-binding protein [Escherichia coli 53638].
---------------------------------------------------------------MTKKKAHKL
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVLLRD
-GEAFLFGANITPMAVASTH-VVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV
AKGKKQHDKRSDIKEREWQVDKARIMK-NAHR---------------------------
>YP_670510|1-160 SsrA-binding protein [Escherichia coli 536].
---------------------------------------------------------------MTKKKAHKP
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVLLRD
-GEAFLFGANITPMAVASTH-VVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV
AKGKKQHDKRSDIKEREWQVDKARIMK-NSHR---------------------------
>NP_289172|1-160 SsrA-binding protein [Escherichia coli O157:H7 EDL933].
---------------------------------------------------------------MTKKKAHKP
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVLLRD
-GEAFLFGANITPMAVASTH-VVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKXGV
AKGKKQHDKRSDIKEREWQVDKARIMK-NAHR---------------------------
>ZP_00718288|1-160 COG0691: tmRNA-binding protein [Escherichia coli E110019].
---------------------------------------------------------------MTKKKAHKP
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-EKANISDSYVLLRD
-GEAFLFGANITPMAVASTH-VVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV
AKGKKQHDKRSDIKEREWQVDKARIMK-NAHR---------------------------
>NP_311509|1-160 SsrA-binding protein [Escherichia coli O157:H7 str. Sakai].
---------------------------------------------------------------MTKKKAHKP
G-----SA--------------TIALNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVLLRD
-GEAFLFGANITPMAVASTH-VVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYW-KNAWCKVKIGV
AKGKKQHDKRSDIKEREWQVDKARIMK-NAHR---------------------------
>ZP_01538195|1-160 SsrA-binding protein [Serratia proteamaculans 568].
---------------------------------------------------------------MTKKKAHKP
G-----SA--------------TIAQNKRARFEYAIE-EEFEAGLSLQGWEVKSLRA-GKANISDSYVTFRD
-GEAYLFGATVSPLNVASSH-VVCDPTRTRKLLLKKRELDSLLGRVNRDGYTVVALSMYW-KNAWAKIKIGV
AKGKKEHDKRDDIKDREWQTAKSRIMK-HANR---------------------------
>YP_048946|1-160 SsrA-binding protein [Erwinia carotovora subsp. atroseptica SCRI1043].
---------------------------------------------------------------MTKKKAYKP
G-----SA--------------TIAQNKRARHEYSIE-EEFEAGLVLQGWEVKSLRA-GKANLSDSYVTFMN
-GEAYLFGATITPLNVASSH-VVCDPIRTRKLLLNKREMDSLFGRVSRDGYTVVALSMYW-KNAWSKVKIGV
AKGKKDHDKRDDIKEREWKLDKARIMK-NANR---------------------------
>ZP_00830282|1-164 COG0691: tmRNA-binding protein [Yersinia frederiksenii ATCC 33641].
-----------------------------------------------------------MINTMTKKKAYKP
G-----SA--------------TIAQNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVMFKN
-GEAFLFGATITPLNVASTH-VVCEPMRTRKLLLNKRELDSLFGRVNREGYTVVALSMYW-KNAWTKIKIGV
AKGKKDNDKRDDIRDREWKLDKARIMK-HANR---------------------------
>NP_404714|1-160 SsrA-binding protein [Yersinia pestis CO92].
---------------------------------------------------------------MTKKKAYKP
G-----SA--------------TIAQNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVMFKN
-GEAFLFGATITPLNVASTH-VVCEPMRTRKLLLNKRELDSLFGRVNREGYTVVALSMYW-KNAWVKVKIGV
AKGKKDNDKRDDIRDREWKLDKARIMK-HANR---------------------------
>NP_670378|1-164 SsrA-binding protein [Yersinia pestis KIM].
-----------------------------------------------------------MTDTMTKKKAYKP
G-----SA--------------TIAQNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVMFKN
-GEAFLFGATITPLNVASTH-VVCEPMRTRKLLLNKRELDSLFGRVNREGYTVVALSMYW-KNAWVKVKIGV
AKGKKDNDKRDDIRDREWKLDKARIMK-HANR---------------------------
>ZP_00822640|1-164 COG0691: tmRNA-binding protein [Yersinia bercovieri ATCC 43970].
-----------------------------------------------------------MINIMTKKKAYKP
G-----SA--------------TIAQNKRARHEYFIE-QEFEAGLSLQGWEVKSLRA-GKANISDSYVTFRN
-GEAFLFGATITPLNVASTH-VVCEPMRTRKLLLNKRELDSLIGKVNRDGFTVVALSMYW-KNAWVKVKIGV
AKGKKDHDKRDDIKDREWQVDKARIMK-HANR---------------------------
>ZP_00827166|1-164 COG0691: tmRNA-binding protein [Yersinia mollaretii ATCC 43969].
-----------------------------------------------------------MINIMTKKKAYKP
G-----SA--------------TIAQNKRARHEYFIE-QEFEAGLSLQGWEVKSLRA-GKANISDSYVTFRN
-GEAFLFGATITPLNVASTH-VVCEPMRTRKLLLNKRELDSLIGKVNRDGFTVVALSVYW-KNAWVKVKIGV
AKGKKDHDKRDDIKDREWQVDKARIMK-HANR---------------------------
>YP_001005327|1-160 SsrA-binding protein (small protein B) [Yersinia enterocolitica subsp. enterocolitica 8081].
---------------------------------------------------------------MTKKKAYKP
G-----SA--------------TIAQNKRARHEYFIE-EEFEAGLSLQGWEVKSLRA-GKANISDSYVTFRN
-GEAFLFGATITPLNVASTH-VVCEPMRTRKLLLNKRELDSLIGKVNRDGFTVVALSVYW-KNAWVKVKIGV
AKGKKDHDKRDDIKDREWKLDKARIMK-HANR---------------------------
>ZP_00833858|1-164 COG0691: tmRNA-binding protein [Yersinia intermedia ATCC 29909].
-----------------------------------------------------------MINTMTKKKAYKP
G-----SA--------------TIAQNKRARHEYFIE-EEFEAGLALQGWEVKSLRA-GKANISDSYVTFRN
-GEAFLFGATITPLNVASTH-VVCEPMRTRKLLLNKRELDSLLGKVNRDGFTVVALSVYW-KNAWVKVKIGV
AKGKKDHDKRDDIKDREWQLDKARIMK-HANR---------------------------
>ZP_00133836|1-159 COG0691: tmRNA-binding protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074].
-----------------------------------------------------------------MAKKPKV
A-----SN--------------TIALNKRARHEYFIE-EEIEAGLELQGWEVKSLRA-GKANIGDSYVTFRN
-GEAFLFGATITPLNMASTH-IVCDPTRTRKLLLNKRELDSLFGKVNRDGMTVVALSLYW-KNAWAKVKVGV
AKGKKLHDKREDIKDREWQVAKQRIMK-NANRG--------------------------
>NP_873607|1-160 SsrA-binding protein [Haemophilus ducreyi 35000HP].
-----------------------------------------------------------------MAKKPKV
P-----SN--------------TIALNKRARHEYFIE-DEIEAGLALQGWEVKSLRA-GKANIGDSYVTFRH
-GEAFLFGATITPLNMASTH-IVADPTRTRKLLLNQRELDSLFGKVNRDGMTVVALSLYW-KNAWAKVKIGL
AKGKKLHDKREDIKDREWHVTKQRIMK-NAGRGS-------------------------
>ZP_00156840|1-161 COG0691: tmRNA-binding protein [Haemophilus influenzae R2866].
----------------------------------------------------------------MTKKKVKP
N-----SN--------------TIALNKRARHDYFIE-DEIEAGLELQGWEVKSMRA-GKANISDSYVIFKN
-GEAFLFGASIQPLNVASTH-IVCDPTRTRKLLLNKRELTSLFGKANRDGFTIVALSLYW-KSAWAKVKIGL
AKGKKQQDKRDDIKEREWKVTKDRIMK-NAHRRS-------------------------
>NP_439144|1-161 SsrA-binding protein [Haemophilus influenzae Rd KW20].
----------------------------------------------------------------MTKKKVKP
N-----SN--------------TIALNKRARHDYFIE-DEIEAGLELQGWEVKSMRA-GKANISDSYVIFKN
-GEAFLFGASIQPLNVASTH-IVCDPTRTRKLLLNKRELASLFGKANRDGFTIVALSLYW-KSAWAKVKIGL
AKGKKQQDKRDDIKEREWKVTKDRIMK-NAHRRS-------------------------
>NP_245154|1-160 SsrA-binding protein [Pasteurella multocida subsp. multocida str. Pm70].
----------------------------------------------------------------MTKKKVKV
G-----TN--------------TIALNKRARHDYFIE-DEMEAGLELQGWEVKSMRA-GKANISDSYIIFKQ
-GEAYLFGATIQPLNVASTH-IVCDPTRTRKLLLKQKELASLFGKANRDGYTIVALSLYW-KGAWAKLKIGL
AKGKKQHDKREDIKEREWKVTKDRIMK-NARLG--------------------------
>ZP_00132517|1-160 COG0691: tmRNA-binding protein [Haemophilus somnus 2336].
----------------------------------------------------------------MTKKKAKV
A-----SN--------------TIALNKRARHDYFIE-DEIEAGLSLQGWEVKSMRA-GKASIGDSYIIFKH
-GEAYLFGATIQPLSVASTH-IVCDPTRTRKLLLNQKELASLFGKANRDGFTIVALSLYW-KGPWAKVKIGL
AKGKKLHDKREDIKDREWKVTKDRIMK-NAQRG--------------------------
>ZP_00733500|1-160 tmRNA-binding protein [Actinobacillus succinogenes 130Z].
----------------------------------------------------------------MAKKKNKA
G-----DN--------------TIALNKRARHDYFIE-EEIEAGLSLQGWEVKSMRA-GKANISDSYVIFNN
-GEAFLFGATIQPLSVASTH-VVCDPTRTRKLLLNERELASLFGKANRDGYTLVALSLYW-KNAWAKLKIGL
AKGKKQHDKREDIKDREWKVQKDRIMK-NAHRG--------------------------
>YP_088697|1-163 SsrA-binding protein [Mannheimia succiniciproducens MBEL55E].
-------------------------------------------------------------MIYMTKKKVKP
G-----SN--------------TIALNKRARHDYFIE-EELEAGLSLQGWEVKSMRA-GKANISDSYIIFRD
-GEAYLFGATIQPLTVASTH-VVCDPTRTRKLLLNQRELASLFGKANRDGYTIVALSLYW-KNAWAKIKIGL
AKGKQQHDKRNDIKDREWKMQKERIMK-NANRG--------------------------
>YP_205385|1-161 SsrA-binding protein [Vibrio fischeri ES114].
--------------------------------------------------------------MAKKKSKDKA
G-----SN--------------TIAMNKQARHEYFID-DEIEAGIELQGWEVKSLRS-GKVNIAESYVYVRD
-GEIFISGMTITPLQAASTH-VIANPTRIRKLLMSRKEIDNLIGRVNREGMTLVATTMYW-VRSWAKIKVGV
AKGKKLHDKRTDSKEKDWNRDKARIMK-SSLR---------------------------
>ZP_00990694|1-161 SsrA-binding protein [Vibrio splendidus 12B01].
--------------------------------------------------------------MAKNKSKSKA
G-----SN--------------TIALNKKARHEYFID-DEIEAGLELQGWEVKSLRE-GKTNIAESYVYIRD
-GEAFISGMTITPLTQASTH-IVANPTRIRKLLMSRKELDNLIGRINREGMTLVATALYW-SRSWAKIKVGV
AKGKKLHDKRTDMKEKDWARDKARIMK-SNLR---------------------------
>NP_230495|1-161 SsrA-binding protein [Vibrio cholerae O1 biovar eltor str. N16961].
--------------------------------------------------------------MTKKKTNTKA
G-----SN--------------TIALNKKARHEYFIE-DEFEAGMELQGWEVKSLRQ-GKANIAESYVYIKD
-GEAFISGMTIIPLQQASTH-VVANPTRIRKLLLSRRELDNLFGRINREGMTLTALSLYW-SRSWVKIKIGV
AKGKKLHDKREDLKEKEWQRQKDRVMK-SALR---------------------------
>ZP_01482048|1-161 hypothetical protein VchoR_02002047 [Vibrio cholerae RC385].
--------------------------------------------------------------MTKKKTNTKA
G-----SN--------------TIALNKKARHEYFIE-DEFEAGMELQGWEVKSLRQ-GKANIAESYVYIKD
-GEAFISGMTIIPLQQASTH-VVTNPTRIRKLLLSRRELDNLFGRINREGMTLTALSLYW-SRSWVKIKIGV
AKGKKLHDKREDLKEKEWQRQKDRVMK-SALR---------------------------
>NP_759368|1-161 SsrA-binding protein [Vibrio vulnificus CMCP6].
--------------------------------------------------------------MAKKNSKPKA
G-----SN--------------TIALNKKARHEYFIE-DEIEAGMELQGWEVKALRQ-GKANISESYVFMRD
-GEAFVSGMTITPLNQASTH-VVANPTRVRKLLMSRRELDNLLGRINREGMTLAALSLYW-ARSWVKIKIGV
AKGKKLHDKRDDIKDRDWQRQKARVMK-SSLR---------------------------
>NP_797023|1-161 SsrA-binding protein [Vibrio parahaemolyticus RIMD 2210633].
--------------------------------------------------------------MAKKKSKQKA
G-----SN--------------TIALNKKARHEYFIE-DEIEAGLELQGWEVKALRQ-GKANISESYVFMRD
-GEAFVSGMTITPLNQASTH-VVANPTRVRKLLMSRRELDNLLGRINREGMTLTALSLYW-SRSWVKIKIGV
AKGKKLHDKRTDLKEKDWAREKARVMK-SALR---------------------------
>ZP_01260327|1-161 SsrA-binding protein [Vibrio alginolyticus 12G01].
--------------------------------------------------------------MAKKKTKQKA
G-----SN--------------TIALNKKARHEYFID-DEIEAGLELQGWEVKALRQ-GKANISESYVFMRD
-GEAFVSGMTITPLNQASTH-VVANPTRVRKLLMSRRELDNLFGRVNREGMTLTALSLYW-SRSWVKLKIGV
AKGKKLHDKRTDLKEKDWAREKARVMK-SALR---------------------------
>ZP_01476420|1-161 hypothetical protein VEx2w_02000898 [Vibrio sp. Ex25].
--------------------------------------------------------------MAKKKTKQKA
G-----SN--------------TIALNKKARHEYFID-DEIEAGLELQGWEVKALRQ-GKANISESYVFMRD
-GEAFVSGMTITPLNQASTH-VVANPTRVRKLLMSRRELDNLFGRVNREGMTLTALSLYW-SRSWVKLKIGV
AKGKKLHDKRTDLKEKDWAREKARVMK-STLR---------------------------
>YP_128913|1-158 SsrA-binding protein [Photobacterium profundum SS9].
-----------------------------------------------------------------MAKKPNK
S-----DN--------------TIAKNRTARHEFAIQ-DDYEAGLQLQGWEVKAIRN-GKVNIAESYVFLRD
-GEAFISGVTITPLNAASTH-VVADPTRTRKLLLNRKEIDKLLGAVNREGQTIVALSMYW-KASWVKLKIGT
ARGKKLHDKRADSKSRDWARDKQRIMK-HSTR---------------------------
>ZP_01237308|1-160 SsrA-binding protein [Vibrio angustum S14].
---------------------------------------------------------------MAKKPNKKP
G-----SN--------------TIAKNKTARFEFAIN-DEYEAGMQLQGWEVKAIRD-GKVNMTESYVFLRN
-GEAFISGLTITPLNAASTH-VVADPTRVRKLLLNRREIDKLAGAVNRDGETIVALNMYW-KASFVKIKIGT
ARGKKLHDKRADSKSKDWQRDKARILK-SSNR---------------------------
>YP_466883|1-163 SsrA-binding protein [Anaeromyxobacter dehalogenans 2CP-C].
------------------------------------------------------------MKGKAGGKAADA
A-----EK--------------VAASNRRARFDYDIE-DTWEAGLVLTGSEVKSLRE-GNVNLSDAYAMPRG
-EELWLLNCRIGEYKQ-AAH-FGHAPLRDRKLLMNRAEIDRVRGKVEQRGYTLVPLRIYF-KQGWAKVELGL
ARGRSHEDRRGAIAERESKREMDRALA-RGRRR--------------------------
>YP_630286|1-162 SsrA-binding protein [Myxococcus xanthus DK 1622].
----------------------------------------------------------MTSGGKSKGVGSEP
G-----VR--------------VIAENRRARFDYTVD-EKVEAGLALTGSEVKSLRD-GIANLSDAYALPKG
-DELFLLNANIGSYKA-ASF-FDHLPTRGRKLLMHRGEIDRWTAKVRERGYSIIPLVLYF-RNGRAKVELGL
CRGKTHEDRRHDIKERETKREMDRAMR-RR-----------------------------
>ZP_01460081|1-161 SsrA-binding protein [Stigmatella aurantiaca DW4|3-1].
-----------------------------------------------------------MAGGQAKGAGGAS
G-----VK--------------VITENRKARAAYSVD-EKLEAGLELLGSEVKSLRD-GTANLSDAYALPKG
-NELYLLNAHIGTYKP-ANV-FTHEPTRGRKLLLHREEIDRWAAKVRERGYSIIPLVLYF-KNGRAKVELGL
CRGKTHEDRRQDIKERETKREMDRAVR-RR-----------------------------
>YP_190513|1-164 SsrA-binding protein [Gluconobacter oxydans 621H].
-------------------------------------------------------------MAGKKTKSGMI
S-----HG--------------MAAQNRKGRFDYTIL-ETTEAGIVLKGPEVKSLRL-GRATITEAYAAERD
-GEIWLFNSYIPEYQG-GVL-SRFEPRAPRKLLMHRKQIAHFLGAVSRAGASLVPLDIHFNARGMAKVTLGL
GQGRRKEDKRHAIAERDWKRDKARLVR-SSGKDY-------------------------
>YP_745017|1-162 ssrA-binding protein [Granulibacter bethesdensis CGDNIH1].
------------------------------------------------------------MAETKSGKSGLI
S-----HG--------------VAAQNRKARFDYTIK-ETVEAGLVLKGPEVKSLRH-GRATLSEAWAGERD
-GEMFLFNAYIPEYQG-GVL-SRFEPRSPRKLLLKRKQINHLLGAVQKQGQTVVPLQIHFNERGMAKVLLGV
AEGRNKADKRAAIASRDWQRDKARLMR-EKG----------------------------
>ZP_01144363|1-159 SsrA-binding protein [Acidiphilium cryptum JF-5].
--------------------------------------------------------------MAEPRKSGLI
S-----HG--------------IAAQNRKARFNYTIK-DTVEAGIVLRGAEVKSLRM-GRATLSEAFAGERD
-GEMYLFNMYIPEYQG-GVL-SRFDTKGPRKLLLKRKQIDQLLGAIARQGSTVVPLDVHFNPRGLAKVTLGI
AEGRKQHDKRQAIAKRDWERDKARILK-NR-----------------------------
>NP_966523|1-149 SsrA-binding protein [Wolbachia endosymbiont of Drosophila melanogaster].
------------------------------------------------------------------------
------ME--------------VIAENRKARFEYFIL-EEFEAGMVLLSSEVKSLRE-RKVNISDAYVVEKN
-SEVWLHNMHIAEYKA-ANR-KNHKPKRERKLLLHKKEINKLIGQIKTAGITVVPLSVYFNDKGFAKTKIAI
VKGKKLYDKRATIKQREWDREKSRLSK-NNL----------------------------
>YP_197914|1-149 SsrA-binding protein [Wolbachia endosymbiont strain TRS of Brugia malayi].
------------------------------------------------------------------------
------ME--------------VIAENRKARFEYFIL-EEFEAGMVLLSSEVKSLRE-RKVNISDAYVTEKN
-GEIWLHNMHIAEYKA-ANK-KKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYFNDKGLVKTRIAI
VKGKKLYDKRATIKQREWNRAKSRLSK-NNL----------------------------
>YP_302735|1-148 SsrA-binding protein [Ehrlichia canis str. Jake].
------------------------------------------------------------------------
------MD--------------VIIENRKVRFNYFII-QEFDAGIVLIGSEVKSLRQ-RKVSIAEAYVTEKN
-MELWLCNLHISEYNHASTK--NHNPTRPRKLLLRKKQIYKISGNIKNDGFTVVPLSLYFNEKGLAKAKIVI
VKGKKLHDKRETIKTRDWNREKSRVLR-GN-----------------------------
>YP_506963|1-149 SsrA-binding protein [Ehrlichia chaffeensis str. Arkansas].
------------------------------------------------------------------------
------MD--------------IVVENRKVRFNYFII-QEFDAGIVLIGSEVKSLRQ-RKVSIAEAYVTERN
-MELWLCNLHISEYNQASTR--NHNPTRPRKLLLRKKQIYKISGNIKNDGFTVVPLCLYFNDKGIAKVKVVI
VKGKKLHDKRETIKTRDWNREKSRILR-GGN----------------------------
>YP_179945|1-148 SsrA-binding protein [Ehrlichia ruminantium str. Welgevonden].
------------------------------------------------------------------------
------MD--------------IIIENRKVRFNYFII-QEFDAGIVLIGSEVKSLRQ-RKVSIAESYVTERN
-MELWLCNLHISEYTQANTK--NHNPTRPRKLLLKKKQIYKISGNMKNDGFTVVPLFLYFNDKGIAKAKIVI
VKGKKLHDKRETIKARDWNREKSRILR-GG-----------------------------
>YP_195997|1-148 SsrA-binding protein [Ehrlichia ruminantium str. Gardel].
------------------------------------------------------------------------
------MD--------------IIIENRKVRFNYFII-QEFDAGIVLIGSEVKSLRQ-RKVSIAESYVTERN
-MELWLCNLHISEYTQANTK--NHNPTRPRKLLLKKKQIYKISGNMKNDGFTVVPLFLYFNDKGIAKAKIVI
VKGKKLHDKRETIKARDWNREKNRILR-GG-----------------------------
>YP_505836|1-149 SsrA-binding protein [Anaplasma phagocytophilum HZ].
------------------------------------------------------------------------
------MD--------------IVAENRKVRFNYTIL-SEYDAGIVLLGSEVKSLRQ-HKVSMGDAYVLESG
-MELWVHNLHISEYNR-SSY-KNHSPLRVRKLLLRRREINKIAGSVKASGITVVPRLVYFNERGLAKVRIAL
VKGKKLYDKREAIKAREWEREKGRTMK-RDI----------------------------
>YP_154258|1-149 SsrA-binding protein [Anaplasma marginale str. St. Maries].
------------------------------------------------------------------------
------ME--------------IVAENRKARFDYFVL-QEYDAGMVLVGSEVKSLRQ-RKVNMGDAYVLEKD
-MELWIHNLHISEYNR-ADR-KNHKPLRVRKLLLRKREIHKIAGNIKVSGLAVVPLMIFFNNKGIAKIKIAI
VKGKKLYDKREAIKTRDWQREKSRISR-REV----------------------------
>YP_067375|1-152 SsrA-binding protein [Rickettsia typhi str. Wilmington].
---------------------------------------------------------------------MTE
Y-----KK--------------VIAQNKKAIFNYFIE-EILEAGIVLKGSEVQSLRQ-GKASIDESYASDNG
-HEVFLYNCHITEYEK-ANR-FNHSTRRPRKLLLHTKEIKKIIGKIRIKGYTLVALSMYFNKNNKVKVELGI
AKGKKLYDKRATIKEKDWKKDQSRLIR-QK-----------------------------
>NP_220811|1-152 SsrA-binding protein [Rickettsia prowazekii str. Madrid E].
---------------------------------------------------------------------MIE
D-----KK--------------VIVQNKKALFNYFIE-EILEAGIVLKGSEVQSLRQ-GKASIEESHASDNG
-HEVFLYNCHITEYEK-ANR-FNHSTRRPRKLLLHAKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGI
AKGKKLYDKRAAIKEKDWKKDQSRLIR-QK-----------------------------
>ZP_01347662|1-152 hypothetical protein RcanM_01000610 [Rickettsia canadensis str. McKiel].
---------------------------------------------------------------------MTR
Y-----KK--------------VIAQNKKALFNYFIE-ERLEAGIVLKGSEVQSLRQ-GKASIEESYAGDTG
-HELFLYNCHIAEYEK-ANK-FNHATRRPRKLLLHTKEMKKIIGKIKIKGYTLVALSMYFNKKNKVKVELGL
AKGKKLYDKRESIKEKDWQRDQSRLIR-QK-----------------------------
>YP_537909|1-152 tmRNA-binding protein [Rickettsia bellii RML369-C].
---------------------------------------------------------------------MME
Y-----KK--------------IIAQNKKALFNYFIE-ERLEAGIVLKGSEVQSLRQ-GKASIEESHAADTG
-NEVFLYNCHIAEYEK-ANR-FNHSTRRPRKLLLHKKEINKIIGRTKIKGYTLVALSMYFNKKNKIKIELGI
AKGKKLHDKRESIKEKDWKRDQSRLIR-QK-----------------------------
>ZP_01380142|1-151 hypothetical protein RbelO_01000936 [Rickettsia bellii OSU 85-389].
----------------------------------------------------------------------ME
Y-----KK--------------IIAQNKKALFNYFIE-ERLEAGIVLKGSEVQSLRQ-GKASIEESHAADTG
-NEVFLYNCHIAEYEK-ANR-FNHSTRRPRKLLLHKKEINKIIGRTKIKGYTLVALSMYFNKKNKIKIELGI
AKGKKLHDKRESIKEKDWKRDQSRLIR-QK-----------------------------
>ZP_00340298|1-152 COG0691: tmRNA-binding protein [Rickettsia akari str. Hartford].
---------------------------------------------------------------------MTE
Y-----KK--------------VIAQNNKAIFNYFIE-ERLEAGIVLNGSEVQSLRQ-GKASIEESHAADTG
-HEVFLYNCHIAEYEK-ANR-FNHSTRRPRKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKQNKVKVELGI
AKGKKLHDKRESIKEKDWKRDQSRLIR-QK-----------------------------
>YP_246677|1-152 SsrA-binding protein [Rickettsia felis URRWXCal2].
---------------------------------------------------------------------MTE
Y-----KK--------------VIAQNKKALFNYFIE-ERLEAGIVLKGSEVQSLRQ-GKASIEESHAADTG
-HEVFLYNCHIAEYEK-ANR-FNHSTRRPRKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGI
AKGKKLHDKRESIKEKDWKRDQSRLIR-QK-----------------------------
>ZP_00153635|1-152 COG0691: tmRNA-binding protein [Rickettsia rickettsii].
---------------------------------------------------------------------MTE
Y-----KK--------------VIAQNKKALFHYFIE-ERLEAGIVLKGSEVRSLRQ-GKASIEESHAADTG
-HEVFLYNCHIAEYEK-ANR-FNHATRRPRKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGI
AKGKKLHDKRESIKEKDWKRDQSRLIR-QK-----------------------------
>NP_360233|1-152 SsrA-binding protein [Rickettsia conorii str. Malish 7].
---------------------------------------------------------------------MTE
Y-----KK--------------VIAQNKKALFNYFIE-ERLEAGIVLKGSEVRSLRQ-GKASIEESHAADTR
-HEVFLYNCHIAEYEK-ANR-FNHATRRPRKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGI
AKGKKLHDKRESIKEKDWKRDQSRLIR-QK-----------------------------
>ZP_00141969|1-152 small protein B homolog [Rickettsia sibirica 246].
---------------------------------------------------------------------MTE
Y-----KK--------------VIAQNKKALFNYFIE-ERLEAGIVLKGSEVRSLRQ-GKASIEESHAADTG
-HEVFLYNCHIAEYEK-ANR-FNHATRRPRKLLLHTKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGI
AKGKKLHDKRESIKEKDWKRDQSRLIR-QK-----------------------------
>YP_426951|1-160 SmpB protein [Rhodospirillum rubrum ATCC 11170].
-------------------------------------------------------------MARAGNSLISH
G---------------------RVAENRRARHDYSIE-ETIEAGLILVGTEVKSLRT-GRANIADSYAGPKS
-GELYLYNAYIPDWTQAVKA-FAHEPRQPRKLLVHRREARRLISAINKDGMTLVPLYLYFNDRGFAKVQLGL
AKGRKAHDKRQAIKEREWNRDKARVLR-DKG----------------------------
>YP_421907|1-153 tmRNA-binding protein [Magnetospirillum magneticum AMB-1].
---------------------------------------------------------------------MVL
P-----GH--------------VAAQNRRARHEYFIV-SEVEAGIMLVGTEVKSLRV-GKGNINEAFAGPMQ
-GELFLFNAYIPEYQS-KMP-FPHETRRPRKLLLHKREMAKLMSAITKDGMTLVPLDIHFGQRGIAKIQLGL
AKGKKLHDKREAIKERDWNRDKARLMR-DKG----------------------------
>ZP_00054157|1-153 COG0691: tmRNA-binding protein [Magnetospirillum magnetotacticum MS-1].
---------------------------------------------------------------------MVL
P-----GH--------------VAAQNRRARHEYFIV-SEVEAGIMLVGTEVKSLRV-GKGNINEAFAGPMQ
-GELYLFNAYIPEYQS-KMP-FPHETRRPRKLLLHKREMAKLMSAIAKDGMTLVPLDIHFAQRGIAKVQLGL
AKGKKLHDKREAIKERDWNRDKARLMR-DKG----------------------------
>ZP_00913448|1-157 SmpB protein [Rhodobacter sphaeroides ATCC 17025].
-----------------------------------------------------------------MVKHSDP
N-----SK--------------LIAENRRARFDYFIE-EEIEAGIILMGSEVKSLRQ-GGSNIGESYASVEN
-GELWLINGYIAPYLQAKTW--GHEERRKRKLLVSRRELARLWNATAREGMTIVPIRMYFNDRGIVKLKIGI
AKGKKLSDKRATEAKRDWGREKQRLLK-QHS----------------------------
>YP_353967|1-157 SsrA-binding protein [Rhodobacter sphaeroides 2.4.1].
-----------------------------------------------------------------MAKHSDP
N-----SK--------------LIAENRRARFDYFIE-EEIEAGIMLLGSEVKSLRQ-GGSNIGESYASVEE
-GELWLINGYIAPYLQAKTW--GHEERRKRKLLVSRRELARLWTATAREGMTIVPIRMYFNDRGIVKLKIGI
AKGKKLSDKRETSAKRDWSREKQRLLK-QNS----------------------------
>ZP_00917426|1-195 SmpB protein [Rhodobacter sphaeroides ATCC 17029].
---------------------------MPRPRQRRARGFDAPSPGSPFPLRALDSGPPLAYLRPVMAKHSDP
N-----SK--------------LIAENRRARFDYFIE-EEIEAGIMLLGSEVKSLRQ-GGSNIGESYASVEE
-GELWLINGYIAPYLQAKTW--GHEERRKRKLLVSRRELARLWTATAREGMTIVPIRMYFNDRGIVKLKIGI
AKGKKLSDKRETSAKRDWSREKQRLLK-QNS----------------------------
>ZP_00630086|1-156 SmpB protein [Paracoccus denitrificans PD1222].
----------------------------------------------------------------MAT-KSDP
N-----YK--------------IIAENRRARFDYFIE-SDLEVGIVLTGSEVKSLRT-GQSNIAESYASVEN
-GELWLINAYIAAYKQ-AGV-FGHEERRRRKLLVSRKELARLWQAIGREGMTLVPLVMYFNDRGKVKLKIGV
AKGKKVADKRETAAKRDWNRQKQRLLK-QG-----------------------------
>YP_507973|1-158 SsrA-binding protein [Jannaschia sp. CCS1].
---------------------------------------------------------------MAKK-PDNP
N-----YK--------------VIAENRRARFDYAIE-SDLEVGIILEGSEVKSLRQ-GQSNIAESYAEVKE
-GELWLVNSYIAPYVQ-AKT-FGHEEKRRRKMLVSRKELSKLWNATQREGMTLVPIVMYFNHKGLVKLKIGI
AKGKKAQDKRETSAKRDWNRQKARLLK-QNG----------------------------
>ZP_01584153|1-160 SsrA-binding protein [Dinoroseobacter shibae DFL 12].
--------------------------------------------------------------MAKPKTPEEK
N-----YK--------------VIAENRRARREYAIE-EDLEVGIVLEGSEVKSLRE-GGSNIAESYATVDD
-GELWLVNSYIAPYAQAKTW--KHEERRRRKLLVSRRELSRLWNATQRQGMTLVPLVMYFNHRGLVKLKIGV
AKGKKLADKRQTDAKRDWNRQKQRLLK-QNL----------------------------
>ZP_00998797|1-158 SsrA-binding protein [Oceanicola batsensis HTCC2597].
---------------------------------------------------------------MANE-KTNP
N-----YK--------------VIAENRRARYDYAIE-EDLECGIVLEGSEVKSLRE-GGSNVAESYATVDD
-GELWLVNSYIAPYDQ-AKT-FGHEERRRRKLLVSRKELARLWQATARKGMTLVPLVLYFNHRGIAKLKIGI
AKGKKTVDKRDTSAKRDWNRQKQRLLK-QGG----------------------------
>ZP_01034904|1-158 SsrA-binding protein [Roseovarius sp. 217].
---------------------------------------------------------------MAKD-KENP
N-----YK--------------VIAENRRARYDFAIE-DDLECGIILEGSEVKSLRV-NSANIAESYAMVEN
-GELWLVNSYIAPYEQ-AKT-FGHDEKRRRKLLVSKKEMSRLWSDTQRKGMTLVPLVLYFNHRGIAKLKIGI
AKGKKNHDKRETEAKRDWARQKQRLLK-DHG----------------------------
>ZP_00959915|1-168 SsrA-binding protein [Roseovarius nubinhibens ISM].
-----------------------------------------------------MGRLTHYLSEMAKP-KDNP
N-----YK--------------VIAENRRARYDYAIE-EDVECGIILEGSEVKSLRE-NSANIAESYAAVDD
-GELWLINSYIAPYEQ-AKT-FGHEEKRRRKLLVSKRELARLWNDTQRKGMTLVPLVLYFNHRGLAKLKIGI
AKGKKNVDKRATEAKRDWNRQKQRLLK-DHS----------------------------
>ZP_01055732|1-158 SsrA-binding protein [Roseobacter sp. MED193].
----------------------------------------------------------------MAQTKSDP
N-----YK--------------VIAENRRARFDYAIE-DDVECGIMLEGSEVKALRE-GGTNIAESYAAVED
-GELWLVNSYVPPYSQ-AKM-FKHEERRRRKLLVSRKQLSDMWNATQRKGMTLVPIVMYFNHKGRAKLKIGI
AKGKKAHDKREAAAKRDWSRQKSRLMK-DHG----------------------------
>YP_681287|1-220 SsrA-binding protein, putative [Roseobacter denitrificans OCh 114].
-MPTCMRRSANATVRATQAGGFKPGMHQRGHAIKTPDRGASADRCHVLAPSQQTAYITGMAQVKSSS-KSDP
N-----YK--------------VVAENRRARFDYAIE-SDVECGIILEGSEVKSLRE-GGANIAESYAAVED
-GELWLVNSYIAPYKQ-AKT-FQHEERRRRKLLISRKQLSDFWNATQRKGMTLVPLVLYFNHRGMAKIKIGV
AKGKKLHDKRETAAKRDWSRQKSRLMK-DHG----------------------------
>ZP_00961981|1-162 SsrA-binding protein [Sulfitobacter sp. NAS-14.1].
-----------------------------------------------------------MSQVKSSS-KSDP
N-----YK--------------VIAENRRARFDYAID-DDVECGIILEGSEVKSLRN-GGANIAESYAAVED
-GELWLVNSYVAPYTQ-AKT-FTHEERRRRKLLVSKKELSNLWNETQRKGMTLVPMVMYFNHRGMAKIKIGI
AKGKKLHDKRETAAKRDWSRQKQRLLK-DHG----------------------------
>ZP_00954666|1-182 SsrA-binding protein [Sulfitobacter sp. EE-36].
-MRLCPLRH--------------------------------------LARRAATPYILGMSQVKSSS-KSDP
N-----YK--------------VIAENRRARFDYAID-DDVECGIILEGSEVKSLRN-GGANIAESYAAVED
-GELWLVNSYVAPYTQ-AKT-FTHEERRRRKLLVSKKELSNLWNETQRKGMTLVPMVMYFNHRGMAKIKIGI
AKGKKLHDKRETAAKRDWSRQKQRLLK-DHG----------------------------
>ZP_01011865|1-161 SsrA-binding protein [Rhodobacterales bacterium HTCC2654].
-------------------------------------------------------------MGSMAKTDENK
N-----YK--------------VIAENRRARFDYAIE-DDLEVGIVLEGSEVKSLRV-NSANIAESYAAVED
-GELWLVNGYIAPYEQ-AKT-FGHEERRRRKLLCSKKELARLWNDTQRKGMTIVPLVLYFNHRGIAKMKVGI
AKGKKVHDKRADTAKKDWNRQKQRLLK-QQG----------------------------
>ZP_01443125|1-156 SsrA-binding protein [Roseovarius sp. HTCC2601].
----------------------------------------------------------------MAKPKTDP
N-----YK--------------VIAENRRARFDYAIE-DDLEVGIVLTGSEVKSLRE-NTSNIAESYAAVED
-GELWLVNSYIAPYER-A-M-FGHEERRRRKLLVSKKELARLWNETQRKGMTIVPLVLYFNHKGIAKMKVGI
AKGKKNHDKRETEAKRDWNRQKQRLLK--QG----------------------------
>YP_614476|1-158 SsrA-binding protein [Silicibacter sp. TM1040].
----------------------------------------------------------------MAKQKTDP
N-----YK--------------VIAENRRARFDYAIE-QDLECGIMLEGSEVKSLRA-GGSNIAESYAAVEE
-GELWLVNSYIAPYEQ-AKV-FKHEERRRRKLLVSRKEMADLWNATQRKGMTLVPLVLYFNHRGMAKIKIGI
AKGKKNHDKREAQAKRDWSRQKQRLLK-DHG----------------------------
>YP_168994|1-158 SsrA-binding protein [Silicibacter pomeroyi DSS-3].
----------------------------------------------------------------MAKKISDP
N-----YK--------------VIAENRRARFDYAIE-SDLECGIMLEGSEVKALRG-GGSNIADSYAAVEN
-GELWLVNAYIPPYEQ-AKM-FKHEERRRRKLLVSRKELANLWNATQRKGMTLVPLVLYFNHKGIAKMKLGI
AKGKKIHDKRETEAKRDWNRQKQRLLK-DNA----------------------------
>ZP_00951709|1-156 SsrA-binding protein [Oceanicaulis alexandrii HTCC2633].
----------------------------------------------------------------MSKKKEDA
G---------------------LVAVNRRARFDYEIE-ETFEAGIQLVGTEVKSLRA-GKANIAESYVSPED
-GEVYLINSDIPPYDH-GNR-FNHAPRRRRKLLLKKKEINKIAGSVAREGRTVVPLRMYFNERGIAKLQIAL
AKGKKTVDKRETKKERDWQRQKSRLMK-TFG----------------------------
>ZP_01198688|1-158 SmpB protein [Xanthobacter autotrophicus Py2].
----------------------------------------------------------------MSSKKTEA
P-----RK--------------IAADNRRARFDFEIG-ETFEAGVMLTGTEVKSLRT-GKATIGESYAAQKA
-GEMWLYNAYIPEYLE-ANR-FNHETRRPRKLLLHKRQIAKLGHAVEREGMTVVALKIYFNDQGRAKVELAL
AKGKKAHDKREASKERDWARDKARLMR-DRG----------------------------
>NP_420011|1-152 SsrA-binding protein [Caulobacter crescentus CB15].
------------------------------------------------------------------------
M-----SK--------------PIAENRRARFDYFIE-ETFEAGIMLTGTEVKSLRT-GRANIAESYASVEG
-REIVLINADIPPYGH-ANR-FNHEPRRHRKLLLHRRQIDKLIGAVQREGRTLVPIKLYWNDKGLAKLEVGL
AKGKKLHDKRDTAAERDWQRDKARLMKGDRGD---------------------------
>ZP_01418781|1-152 SsrA-binding protein [Caulobacter sp. K31].
------------------------------------------------------------------------
M-----TK--------------PIAENRRARYDYFIE-ETMEAGLMLTGTEVKSLRV-GRANIAESYASVEG
-RTIKLINADIPPYGH-ANR-FNHEPRRHRTLLLHRKQIDKLIGAVQRDGRTLIPLKLYWNEKGLAKLEIGL
AKGKKNHDKRETEAARDWQRDKARLMKGDRGD---------------------------
>YP_162456|1-160 SsrA-binding protein [Zymomonas mobilis subsp. mobilis ZM4].
--------------------------------------------------------------MAAFRPPQFK
K-----SK--------------ILAENRRARYEYAFE-DFYEAGLALTGTEVKSLRF-GQGSIAESYAEVKN
-GEVTLINANIPEFSH-GNR-FNHEPKRPRKLLLHEREIRKMQTAVSREGMTVIPVSLYFNNKGKAKLELAI
ARGKKTHDKRATIKERDWKRDQARLLR-DKG----------------------------
>ZP_01303086|1-169 SsrA-binding protein [Sphingomonas sp. SKA58].
----------------------------------------------------------RTERKFDKPMARPR
PETFDKKK--------------IVAENRRAKFEYFLE-DVFEAGIALQGTEVKSLRF-GEGNIAESYAEVKG
-NQVWLVNSNIPEFSH-GNR-FNHESKRPRKLLLHEREIARMHGAVERKGMTLVPLALYFNSRGKVKVELAL
AKGKKTHDKRETIKERDWKRDQQRIMK-AHS----------------------------
>YP_496722|1-160 SsrA-binding protein [Novosphingobium aromaticivorans DSM 12444].
--------------------------------------------------------------MARPVHPEFD
K-----KK--------------VVAENRRARFEYFIE-ETYEAGICLTGTEVKSLRF-GEGSIAESYAEVKN
-GEVWLVNSNVPEFSH-GNR-FNHVPKRPRKLLLKERQIAKFTGAVERKGMTLVPLSIYFNSRGRAKVELAL
AKGKNAADKRTTIKERDWKREKARIMK-DHG----------------------------
>YP_458438|1-160 small protein B [Erythrobacter litoralis HTCC2594].
--------------------------------------------------------------MARPKPETFD
K-----QK--------------TVAENRRARFDYAVE-DKFEAGIALQGTEVKALRA-GEASIAESYAEVRD
-GEAWLINANIPEYSH-GNR-LNHQPRRPRKLLLHNREIERLLGAVERKGMTLVPLSIYFNSRGRAKVELAL
AKGRQAQDKREYIKDRDWKRDKARIMR-DKG----------------------------
>ZP_01040037|1-184 SsrA-binding protein [Erythrobacter sp. NAP1].
-------------------------------------------MVSEIAPQNARLASGSCAPISPATMARPK
PKTFDKQK--------------TVAENRRARFDYAIE-EKFEAGLALQGTEVKALRA-GEATIAESYAEVRD
-GEVWLINSNIPEYSH-GNR-LNHEPRRPRKLLLNGREINKLFGAVERKGMTLVPLSIYFNAQGRAKVELAL
AKGKQAHDKRASIKERDWKRDKARIMR-DRA----------------------------
>ZP_01608382|1-160 SsrA-binding protein [Sphingomonas wittichii RW1].
--------------------------------------------------------------MARPRPAEFE
K-----KK--------------VVAENRRARFDYFLE-QFFEAGIALTGTEVKSLRF-GEGSIAESYAEVKD
-DQVWLVNSNVPEFSH-GNR-FNHEPKRPRKLLLHAREIDKMRNGVSREGMTLIPLSIYFNGRGRAKVELAL
AKGKKLHDKRDTEKERDWKREQQRLLR-DRG----------------------------
>YP_616776|1-161 SsrA-binding protein [Sphingopyxis alaskensis RB2256].
-------------------------------------------------------------MVRPQSAAEFD
K-----KK--------------VVAENRRARFDYAIE-QVFEAGIALQGTEVKSLRF-GEGTIAESYAEVNG
-GEVWLINANIPEFSH-GNR-FNHEPKRPRKLLLNWREINKLHAGVARQGMTLVPLSVYFNSRGRAKVELAL
AKGKKAHDKRESIKERDWKRDKQRLLK-DRG----------------------------
>ZP_01545358|1-159 SsrA-binding protein [Stappia aggregata IAM 12614].
---------------------------------------------------------------MAPRKGGDP
G-----RT--------------IISDNRKARFNYEIE-DTLEAGIELKGTEVKSLRN-GKANIAESYAAEHQ
-GEIWIYNVYIPEYLQ-ANR-FNHEPRRPRKLLLHKREIGKLAGAVQKEGKTIVPLKLYFNEQGRAKLELAL
ARGKKLHDKRETEKKRDWQREKSRLMK-NFS----------------------------
>ZP_01228758|1-157 SmpB, ssrA-binding protein [Aurantimonas sp. SI85-9A1].
----------------------------------------------------------------MAKKKKSA
G-----SN--------------VAAENRKARFNYEIL-DTLEAGLVLTGTEVKSLRE-GRASIAESYASEEG
-GELWLINSNLPEYLQ-ANR-FNHVPKRRRKILVHRTQLSRLASAIQKDGMTLVPLRIYFNDRGVAKLQLAL
ARGKNAPDKRQTMKERDWNRQKQRILK-EA-----------------------------
>NP_540217|1-158 SsrA-binding protein [Brucella melitensis 16M].
----------------------------------------------------------------MNKPKNSP
A-----RK--------------MIAENRKARFNFEIL-DTLEAGLVLTGTEVKSLRA-NQANIAESYASFED
-GEFWLINSYIPEYTQ-GNR-FNHEPRRLRKLLVSRREMSRLFNSVSREGMTVVPLKLYFNDRGRAKLELAL
ARGKKTHDKRETEKKRDWNREKARLLR-DRG----------------------------
>YP_988781|1-158 SsrA-binding protein [Bartonella bacilliformis KC583].
----------------------------------------------------------------MRKKKNVL
I-----RK--------------IIAENRKARFNFELL-EHLEAGIVLNGTEVKSLRS-NHANIAESYASFEN
-EELWLVNAHIPEYTQ-ANR-FNHEPRRLRKLLVSKREIGRFFNAVSREGMTIVPLKLYFNERGCVKLEIAL
ARGKKIHDKRETEKKRDWGREKARLLR-RYG----------------------------
>YP_032100|1-158 SsrA-binding protein [Bartonella quintana str. Toulouse].
----------------------------------------------------------------MNKKRNAP
V-----RK--------------IIADNRKARFNFEIL-DNLEVGLVLQGAEVKSLRS-NHANIAESYASFEN
-GELWLVNSYIPEYTQ-ANR-FNHEPRRLRKLLISKREMARFFNATSREGMTLVPLKLYFNERGRAKLEIAL
ARGKKLHDKRETEKKRDWRCEKARLLK-RYG----------------------------
>YP_033337|1-158 SsrA-binding protein [Bartonella henselae str. Houston-1].
----------------------------------------------------------------MNKKKNAP
V-----RK--------------IIADNRKARFNYEIL-DNLEAGLVLQGAEVKSLRS-NHANIAESYASFEN
-GELWLVNSYIPEYTQ-ANR-FNHEPRRLRKLLISKREMARFFNATSREGMTLVPLKLYFNERGRAKLEIAL
ARGKKLHDKRETEKKRDWGREKARLLK-RYG----------------------------
>YP_532500|1-157 SsrA-binding protein [Rhodopseudomonas palustris BisB18].
-----------------------------------------------------------------MAEKNER
P-----IK--------------VIAENRKARFNYAIE-DTLEAGIALTGTEVKSIRN-GKSTIAESYADPKD
-GEIWLINANIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLMGAVERQGMTLVPLKMYFNERGRVKLQLAL
AKGKQLHDKRDTEKKRDWSREKGRIMR-ARG----------------------------
>NP_948030|1-157 SsrA-binding protein [Rhodopseudomonas palustris CGA009].
-----------------------------------------------------------------MAEKNER
A-----IK--------------VVAENRKARFNYAID-DTIEVGIALTGTEVKSIRN-GKTTIAESYADARG
-SEIWLINANIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLIGAVEREGMTLIPLKLYFNERGRAKLQLAL
AKGKKLHDKRETEKKRDWSREKGRLLR-SRG----------------------------
>YP_781947|1-157 SsrA-binding protein [Rhodopseudomonas palustris BisA53].
-----------------------------------------------------------------MAEKNER
P-----IK--------------VVAENRKARFNYAIE-DTVEAGIALTGTEVKSVRN-GKTTIAESYADSRG
-GEIWLINANIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLMGAVERQGMTLIPLKLYFNEKGRAKLLLAL
AKGKQLHDKRETEKKRDWSKEKGRLMR-AKG----------------------------
>YP_486218|1-157 SsrA-binding protein [Rhodopseudomonas palustris HaA2].
-----------------------------------------------------------------MAEKNER
A-----IK--------------VVAENRKARFNYAIE-DTVEAGISLTGTEVKSVRG-GKATIAESYADSRG
-GEIWLINATIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLMGAIERQGMTLVPLKLYFNEKGRAKLLLAL
AKGKQLHDKRETEKKRDWSREKGRLLR-ARG----------------------------
>YP_569772|1-157 SsrA-binding protein [Rhodopseudomonas palustris BisB5].
-----------------------------------------------------------------MADKNER
A-----IK--------------VVAENRKARFNYAIE-DTIEAGISLTGTEVKSVRS-GKSTIAESYADSRG
-GEIWLINANIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLMGAVERQGMTLIPLKLYFNEKGRAKLLLAL
AKGKQLHDKRETEKKRDWSREKGRLLR-ARG----------------------------
>AAF04322|1-158 SmpB [Bradyrhizobium japonicum].
-----------------------------------------------------------------MADKNER
P-----IK--------------VMAENRKARFNYAIE-DTIEAGIALTGTEVKSIRN-GKSTIAESYADSKN
-GEIWLINATIPEYLQ-GNR-FNHEPKRPRKLLLHRRQINKLIGPVDREGMTLIPLKLYFNGRGRAKLQLAV
AKGKKLHDKRETEKKRDWEPGRRSACC-GARG---------------------------
>NP_771710|1-157 SsrA-binding protein [Bradyrhizobium japonicum USDA 110].
-----------------------------------------------------------------MADKNER
P-----IK--------------VMAENRKARFNYAIE-DTIEAGIALTGTEVKSIRN-GKSTIAESYADSKN
-GEIWLINATIPEYLQ-GNR-FNHEPKRPRKLLLHRRQINKLIGAVDREGMTLIPLKLYFNERGRAKLQLAV
AKGKKLHDKRETEKKRDWSREKGRLLR-ARG----------------------------
>ZP_00859880|1-157 SmpB protein [Bradyrhizobium sp. BTAi1].
-----------------------------------------------------------------MADKKEP
K-----IT--------------VAAENRKARFNYAIE-DTIEAGIALTGTEVKSIRS-GKSTIAESYADSRD
-GEIWLINANIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLMGAVEREGMTLIPLKLYFNERGRAKLLLAV
AKGKKLHDKRESEKKRDWGREKGRLLR-ARG----------------------------
>YP_577512|1-157 SsrA-binding protein [Nitrobacter hamburgensis X14].
-----------------------------------------------------------------MAEKNER
A-----IK--------------VVAENRKARFNYAIE-DTVEAGIALTGTEVKSVRN-GKTTIAESYADSKN
-GEIWLINANIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLLGAVDREGMTLIPLKLYFNERGRAKLLLAV
AKGKKLHDKRESEKKRDWGREKGRLLR-ARG----------------------------
>YP_318539|1-157 SsrA-binding protein [Nitrobacter winogradskyi Nb-255].
-----------------------------------------------------------------MADKGER
A-----IK--------------VVAENRKARFNYAIE-DTVEAGIALTGTEVKSIRN-GKTTIAESYADSKN
-GEIWLINSNIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLMGAVDREGMTLIPLKLYFNERGRAKLLLAI
AKGKKLHDKRESEKKRDWGREKGRLLR-ARG----------------------------
>ZP_01046050|1-157 SsrA-binding protein [Nitrobacter sp. Nb-311A].
-----------------------------------------------------------------MAGKGER
A-----IK--------------VVAENRKARFNYAIE-DTVEAGIALTGTEVKSIRN-GKTTIAESYADSKN
-GEIWLINSNIPEYLQ-ANR-FNHEPKRPRKLLLHRKQINKLMGAVDREGMTLIPLKLYFNERGRAKLLLAI
AKGKKLHDKRESEKKRDWGREKGRLLR-ARG----------------------------
>ZP_01416971|1-159 SsrA-binding protein [Sinorhizobium medicae WSM419].
---------------------------------------------------------------MAPKGSERT
V-----KK--------------VVAENRKARFNYEIV-DTYEAGLVLTGTEVKSLRE-GKANIAESYATDEG
-GEIWLINSYLPEYLQ-ANR-FNHETRRRRKLLLSRREVNRLQGAVNREGMSLIPLRIYFNERGRAKLELAL
GKGKKLHDKRETSKERDWNRQKNRLLK-ERG----------------------------
>NP_385166|1-159 SsrA-binding protein [Sinorhizobium meliloti 1021].
---------------------------------------------------------------MAPKGSERT
V-----KK--------------VVAENRKARFNYEIV-DTYEAGLVLTGTEVKSLRE-GKANIAESYATDEG
-GEIWLINSYLPEYLQ-ANR-FNHETRRRRKLLLSKREVNRLQGAVNREGMSLIPLRIYFNERGRVKLELAL
GKGKKLHDKRETSKERDWNRQKNRLLK-ERG----------------------------
>NP_531722|1-160 SsrA-binding protein [Agrobacterium tumefaciens str. C58].
---------------------------------------------------------------MAPKGSQRV
V-----NK--------------IVAENRKARFNYEII-DTYEAGLVLTGTEVKSLRE-GKANIAESYASDEG
-DEIWLINSHLPEYLQ-ANR-FNHEPRRRRKLLLNKREINRLRAGINRDGMTLVPLKVYFNEKGRAKLELAL
AKGKKLHDKRETEKERDWNRQKSRLLK-GNSQ---------------------------
>NP_354048|1-152 SsrA-binding protein [Agrobacterium tumefaciens str. C58].
-----------------------------------------------------------------------M
V-----NK--------------IVAENRKARFNYEII-DTYEAGLVLTGTEVKSLRE-GKANIAESYASDEG
-DEIWLINSHLPEYLQ-ANR-FNHEPRRRRKLLLNKREINRLRAGINRDGMTLVPLKVYFNEKGRAKLELAL
AKGKKLHDKRETEKERDWNRQKSRLLK-GNSQ---------------------------
>YP_468912|1-159 ssrA-binding (tmRNA-binding) protein [Rhizobium etli CFN 42].
---------------------------------------------------------------MAPKGSQRV
V-----NK--------------VVAENRKARFNYEII-DTYEAGLVLKGTEVKSLRE-GKANIAESYASDED
-GEIWLINSYLPEYLQ-ANR-FNHEPRRRRKLLLSGREIHRLRSAVNREGMTLVPLKIYFNDRGRAKMELAL
AKGKKLHDKRESEKERDWNRQKSRLLK-DNG----------------------------
>YP_767107|1-151 putative RNA binding protein [Rhizobium leguminosarum bv. viciae 3841].
-----------------------------------------------------------------------M
V-----NK--------------VVAENRKARFNYEII-DTYEAGIVLMGTEVKSLRE-GKANIAESYASDEG
-GEIWLINSYLPEYLQ-ANR-FNHEPRRRRKLLLSGREIHRLRSAINREGMTLIPLKIYFNDRGRAKMELAL
AKGKKLHDKRESEKERDWNRQKSRLLK-AHG----------------------------
>NP_107999|1-159 SsrA-binding protein [Mesorhizobium loti MAFF303099].
---------------------------------------------------------------MNQVRKADP
N-----NK--------------TVAENRKARFSYEVL-DTIEAGLVLTGTEVKSLRQ-GQANIQDSYASVEG
-GEIWLINSYLPEYLQ-ANR-FNHEPRRRRKLLLNKREMAKLSQSVDREGMTLVPLKIYFNDQGRAKLLLAV
GRGKKLHDKRETEKQRDWSREKGRLLK-ERG----------------------------
>YP_673504|1-155 SsrA-binding protein [Mesorhizobium sp. BNC1].
-------------------------------------------------------------------MAKNT
N-----IT--------------TVADNRKARFSYEVI-DTLEAGLVLSGTEVKSLRE-GHANIQESYAAVEG
-GEIWLINSHIPEYFA-GNR-FNHEPRRRRKLLLSKKEMARLAQAVEREGMTMVPLKLYFNERGIAKLLLAI
ARGKKLHDKRETLKQRDWSREQARLLK-ERG----------------------------
>ZP_00592674|1-157 SmpB protein [Prosthecochloris aestuarii DSM 271].
----------------------------------------------------------------MAKQQQKP
Q-----YV--------------STILNRKARHEFTIL-ETVVAGIELQGSEVKSIRL-GRASLNESYAIIHR
-GEVWLENMQITPYEH-NTL-ELPDPKRSRKLLLQKSEIIKIQSKLHEKGLTLIPLKAFFNSRGMLKIELGI
AKGKKLFDKRESIKNRDAERQLQRLKH-QY-----------------------------
>ZP_00530728|1-157 SmpB protein [Chlorobium phaeobacteroides BS1].
----------------------------------------------------------------MAKAEKKP
Q-----YV--------------STTLNRKARHEYFIL-DTMVAGIELKGSEVKSVRL-GKASLNESYAIIHR
-GEVWLENMQIAAYEH-NHV-EPIDPKRSRKLLLKREEILKLQTRLHQKGLTLVPLKAFFNKKGVLKIELGL
AKGKQLHDKRETIKERDTQRQLQKLKN-QY-----------------------------
>NP_661464|1-157 SsrA-binding protein [Chlorobium tepidum TLS].
----------------------------------------------------------------MSKKQGKP
E-----YV--------------TAISNRKARFEYEIL-DTIEAGIELLGSEVKSVRL-GKASLSESYAMIHH
-GQVWLENMQITPYEH-NTL-DTLEPKRSRRLLLHKAEIMRLQSKISEKGLTLIPLKAYFNKRGVLKIELGL
ARGKKLYDKRETIKNRDAKRQLQQLRK-QY-----------------------------
>ZP_00661954|1-157 SmpB protein [Prosthecochloris vibrioformis DSM 265].
----------------------------------------------------------------MAKKQQTK
T-----YT--------------QAIQNRKARFEFEIL-DTVVAGIELLGSEVKSVRL-GKASLNESFAIIHH
-GEVWLENMQITPYEF-NHL-DSLEPKRSRKLLLHKAEIAKLQSQISEKGLALIPLKAFFNPKGVLKLELAV
AKGKKLFDKRETIKNRDNERQLQQIKK-QY-----------------------------
>YP_374495|1-157 SsrA-binding protein [Pelodictyon luteolum DSM 273].
----------------------------------------------------------------MAKKQQTR
S-----YT--------------EAIQNRKARYEYQIL-ETIVAGIELLGSEVKSVRL-GKASLNESFATIHH
-DEVWLENMQITPYEF-NHL-DALEPKRSRKLLLHKEEIRRLQSKINEKGLTLIPLKAFFDKNGRLKVELAL
AKGKKLYDKRETIKGRENERHLQQLRK-QY-----------------------------
>ZP_00512718|1-166 SmpB protein [Chlorobium limicola DSM 245].
-------------------------------------------------------MQPINRKNELAKKQEKP
Q-----YI--------------RSIQNRKARFEFHIL-DSVVAGIELLGSEVKSVRL-GKASLNESFAIIHH
-GEVWLENMQITPYEH-NTL-DKLEAKRSRRLLLHRDEIRKLQTKIREKGLTLIPLKAFFTDRGILKIEIAL
AKGKKLYDKRETIKARDTERQMQQIKK-SY-----------------------------
>YP_911290|1-157 SsrA-binding protein [Chlorobium phaeobacteroides DSM 266].
----------------------------------------------------------------MSKKQQPQ
T-----FV--------------QAIHNRKARFEFHIL-ETMVAGIELLGSEVKSVRQ-GKASLNESYAMIHH
-GEVWLENMQITPYEH-NHL-DTLEAKRSRKLLLNREEIRKLETKINEKGLTLVPLKAFFNNRGILKIEIAL
AKGKKLYDKRETIKSRDAERQLQQLKK-TY-----------------------------
>YP_379467|1-157 SsrA-binding protein [Chlorobium chlorochromatii CaD3].
-----------------------------------------------------------------MSKQPQQ
R-----YA--------------EAIVNRKARHEFEII-ETFVAGIQLAGSEVKSVRL-GQASLNESFAIILR
-NEVWLENMQITPYKH-NRM-EVLEAKRSRKLLLHKKEIAKLQAKVSEKGLTLVPLKAFFTPHGLLKIELAI
ARGKKLYDKRETLKNRENQRHLDQLRK-QYS----------------------------
>ZP_01386230|1-157 SsrA-binding protein [Chlorobium ferrooxidans DSM 13031].
----------------------------------------------------------------MSKKQTTQ
H-----YV--------------QAIQNRKARYEFEIL-DTFVTGIQLFGSEVKSVRL-GKASLNDSFAIILR
-NEVWLENMQITPYEH-NHL-EMLEPKRSRKLLLHKAEILKIQAKITEKGLTLVALKAFFSSKGLLKIEIAI
AKGKKLYDKRETIKARENQRQMEQVRK-QY-----------------------------
>ZP_00589743|1-157 SmpB protein [Pelodictyon phaeoclathratiforme BU-1].
----------------------------------------------------------------MAKKQQTQ
Q-----YV--------------QAIQNRKARFEFEIL-DTLVAGIQLFGSEVKSVRL-GQASLSDSFAIILR
-NEIWLEGMQITPYAH-NRM-ELIEAKRSRKLLLHKEEIRKIEAKISEKGLTLVPLKAFFNSKGLLKIELAI
AKGKKLYDKRETIKARENQRQMEQIKK-QY-----------------------------
>ZP_01138685|1-182 SmpB protein [Dehalococcoides sp. BAV1].
--------------------------------------------------------MTGDTLCQAPMHYARI
V-----SNLRLGYDIIHMAEYVTLTTNRKAFHNYFLE-EKYEAGIMLLGTEIKSLRS-GRVNMGDAYVKPQR
-GELWLVNAHISAYEC-SGH-TSHEPMRERKLLMHRKEIVLLMSKVKEKGLTLIPVRIYL-KNDIAKVELSL
GRGKKLYDKRDTVTKRDTERELEREVK-YRNFRR-------------------------
>YP_182206|1-172 SsrA-binding protein [Dehalococcoides ethenogenes 195].
---------------------------------------------------------MHYARIVSNLHLGYD
IIHMAEYV--------------TLTTNRKAFHNYFLE-EKYEAGIMLLGTEIKSLRS-GRVNMGDAYVKPQR
-GELWLVNAHISAYEC-SGH-TSHEPMRERKLLMHRKEIALLMSKVKEKGLTLIPVRIYL-KNDIAKVELSL
GRGKKLYDKRDTITKRDTERELEREVK-YRNFRR-------------------------
>YP_308417|1-172 SsrA-binding protein [Dehalococcoides sp. CBDB1].
---------------------------------------------------------MHYARIVSNLRLGYD
IIHMAEYV--------------TLTTNRKAFHNYFLE-EKYEAGIMLLGTEIKSLRS-GRVNMGDAYVKPQR
-GELWLVNAHISAYEC-SGH-TSHEPMRERKLLMHRKEIALLMSKVKEKGLTLIPVRIYL-KNDIAKVELSL
GRGKKLYDKRDTVTKRDTERELEREVK-YRNFRR-------------------------
>YP_008706|1-153 SsrA-binding protein [Candidatus Protochlamydia amoebophila UWE25].
-------------------------------------------------------------------MKDKH
S---------------------DLVSNRRATHDYEIL-ETFETGIVLQGTEIKSIRD-HGATLQDAYVKVIH
-NELWLIGCNIAHYRF-GNI-HNHEEKRDRKLLMHKREIKKCKGAIQEKGLALIPLALYL-KQGRIKVRIAI
AKGKKSFDKRADLKERDDKRQMQQALK-QQQY---------------------------
>NP_295191|1-160 SsrA-binding protein [Deinococcus radiodurans R1].
--------------------------------------------------------MPPSSLPLFLLFPAAA
T-----MR--------------RVYTNRRAHHEYELL-ERFEAGISLTGSEVKSVRA-GGVDFRDAFARING
-SDVDLEGLYIPVYKE-ATY-NNHEPRRKRRLLLHREEIEKLRRGLEQKGLTLVPTRLYQ-KGRYFKVELAL
ARGKKLHDKRRADAERTVARELREL----------------------------------
>YP_604290|1-143 SsrA-binding protein [Deinococcus geothermalis DSM 11300].
------------------------------------------------------------------------
------MR--------------RVYTNRRAHHEYELL-ERFEAGIALTGSEVKSVRA-GGVDFRDAFARLNN
-GNVELEGLYIPTYTE-ATY-NNHEPRRTRRLLLHREEIGKLKRALEQKGLTLVPTRLYQ-KGRVFKVELAL
ARGKKLHDKRRAEAEKTLRRELREL----------------------------------
>NP_296726|1-151 SsrA-binding protein [Chlamydia muridarum Nigg].
-----------------------------------------------------------------------M
S-----VK--------------EIVSNRKAFHNYEVL-ETFDAGIVLTGTEIKSLRD-HGGNLGDAYVTISK
-GEAWLLQSSIAPYRF-GNI-NNHEERRKRKLLLHKYELQKLDSRVSQKGLTIIPLSFFF-SKGFVKVRIGC
CRGKKSHDKRQALIEREKNRELAAAMK-RSYR---------------------------
>NP_219579|1-151 SsrA-binding protein [Chlamydia trachomatis D|UW-3|CX].
-----------------------------------------------------------------------M
G-----VK--------------EIVSNRKAFHHYEVL-ETLDAGIVLTGTEIKSLRD-HGGNLGDAYVTISK
-GEAWLLQSSIALYRF-GNI-NNHEERRKRKLLLHKYEIHKLDARISQKGLTVVPLSFFF-SKGFVKVRIGC
CRGKKAHDKRQSIIEREKNRELAAAMK-RSYR---------------------------
>YP_327875|1-151 SsrA-binding protein [Chlamydia trachomatis A|HAR-13].
-----------------------------------------------------------------------M
G-----VK--------------EIVSNRKAFHHYEVL-ETLDAGIVLTGTEIKSLRD-HGGNLGDAYVTISK
-GEAWLLQSSIAPYRF-GNI-NNHEERRKRKLLLHKYEIHKLDARISQKGLTVVPLSFFF-SKGFVKVRIGC
CRGKKAHDKRQSIIEREKNRELAAAMK-RSYR---------------------------
>NP_876622|1-165 SsrA-binding protein [Chlamydophila pneumoniae TW-183].
---------------------------------------------------------MLYWFLSPIMGEDLM
A-----QK--------------EIVSNRKALRNYEVI-ETLEAGIVLTGTEIKSLRD-HGGNLGDAYVIVSK
-GEGWLLNASIAPYRF-GNI-YNHEERRKRKLLLHRYELRKLEGKIAQKGMTLIPLGMLL-SRGYVKVRLGC
CRGKKAYDKRRTIIEREKEREVAAAMK-RRHH---------------------------
>NP_444969|1-165 SsrA-binding protein [Chlamydophila pneumoniae AR39].
---------------------------------------------------------MLYWFLSPIMGEDLM
A-----QK--------------EIVSNRKALRNYEVI-ETLEAGIVLTGTEIKSLRD-HGGNLGDAYVIVSK
-GEGWLLNASIAPYRF-GNI-YNHEERRKRKLLLHRYELRKLEGKIAQKGMTLIPLGMXL-SRGYVKVRLGC
CRGKKAYDKRRTIIEREKEREVAAAMK-RRHH---------------------------
>NP_224542|1-151 SsrA-binding protein [Chlamydophila pneumoniae CWL029].
-----------------------------------------------------------------------M
A-----QK--------------EIVSNRKALRNYEVI-ETLEAGIVLTGTEIKSLRD-HGGNLGDAYVIVSK
-GEGWLLNASIAPYRF-GNI-YNHEERRKRKLLLHRYELRKLEGKIAQKGMTLIPLGMFL-SRGYVKVRLGC
CRGKKAYDKRRTIIEREKEREVAAAMK-RRHH---------------------------
>YP_219846|1-150 SsrA-binding protein [Chlamydophila abortus S26|3].
-----------------------------------------------------------------------M
A-----SK--------------EIVSNRKALHNYEVL-ESLEAGIVLTGTEIKSLRD-HGGNLGDAYVAISK
-GEAWLLNASIAPYRF-GNI-YNHEERRKRKLLLHRYEIHKLEVKVAQKGVTIIPLGMFL-SRGYVKVRLGC
CRGKKSHDKRQTIIAREKEREIASAMK-RYR----------------------------
>YP_515478|1-150 ssrA-binding protein [Chlamydophila felis Fe|C-56].
-----------------------------------------------------------------------M
S-----SK--------------EIVSNRKALRNYEVL-DTVDAGVVLTGTEIKSLRD-HGGNLGDAYVTISK
-GEAWLLNASIAPYRF-GNI-YNHEERRKRKLLLHRYEIQKLESKVSQKGITIIPLGMFL-SRGYVKIRLGC
CRGKKAHDKRQTIIAREKQREVESAMK-RYR----------------------------
>NP_829314|1-150 SsrA-binding protein [Chlamydophila caviae GPIC].
-----------------------------------------------------------------------M
S-----SK--------------EIVSNRKALRNYEVL-DTLEAGVVLTGTEIKSLRD-HGGNLGDAYVAISK
-GEAWLLNASIAPYRF-GNI-YNHEERRKRKLLLHRYEIRKLEGRVAQKGITIIPLGMFL-SRGYVKIRLGC
CRGKKAHDKRQTIIAREKQREVESAMK-RYR----------------------------
>NP_603506|1-148 SsrA-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586].
------------------------------------------------------------------------
-------M--------------IIANNKKAFFDYFIE-EKYEAGIELKGSEVKSIKA-GKVSIKEAFVRIIN
-DEIFIMGMSVVPWEF-GSV-YNPEERRVRKLLLHRKEIKKIHEKVKIKGYTIVPLDVHL-SKGYVKMQIAI
AKGKKTYDKRESIAKKDQERNLKREFK-NNNR---------------------------
>YP_594602|1-155 tmRNA-binding protein [Lawsonia intracellularis PHE|MN1-00].
-------------------------------------------------------------------MSAKK
N-----SH--------------LVFENRKARHLYDLL-DFLEAGIVLTGPEVKSLRS-GHASFQDSYVDFKQ
-GEGYIVGLHIPPYNN-AGY-VIQNPDRPRKLLLHRQELKMLASKVEQKGLTIVPLKLYF-KNRKVKTEIAL
AKGRKLYDHRNELKKRAEAMDIKRELA-ARHL---------------------------
>YP_387584|1-155 SsrA-binding protein [Desulfovibrio desulfuricans G20].
-----------------------------------------------------------------MTKKKSS
G-----GA--------------LIAQNKKARHLYELL-EFFEAGIALAGTEVKSLRA-GQVSFTDSYVTIHN
-NEAWIVGMHIAPYAN-AGY-VQHDPDRDRKLLLHAREIDTLRARVEQKGLTVVPVKLYF-KNSRVKLEIAV
GRGKKLHDKRQDIKQRDVERETRREIM-RH-----------------------------
>YP_010049|1-154 SsrA-binding protein [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough].
------------------------------------------------------------------MSKKAP
G-----AN--------------VIAQNKKARHIYELS-DNHEAGISLTGSEVKSLRA-GHVNFRDSYVDFRN
-GEAFLVGLHIAPYDN-AGY-AQHDPDRDRKLLLHAHEIENLARSVEQKGYTVVPTKLYF-ARGKVKVDIAV
GRGKKLHDQREDLKRRAEDRDTQRELA-RF-----------------------------
>YP_867367|1-150 SsrA-binding protein [Magnetococcus sp. MC-1].
-----------------------------------------------------------------------M
T-----FR--------------LIAENRKARFNYEII-EKIEAGIVLQGTEVKSIRA-GKMTLADSYAVVNR
-EELYWLNGQIAHYEH-GNI-HNHEPFRSRKLLLRHKEISRLIGLVKEKGLSIIPLRAYW-KGSKVKLELGI
AKGKKLYDKRATTKERDWQREKQRILK-TNH----------------------------
>YP_398206|1-164 SsrA-binding protein [Prochlorococcus marinus str. MIT 9312].
-------------------------------------------------------------MAKNSNKVRKN
TNKENNFK--------------RLAENRYAKFQYAIS-ETIEAGIELLGTEVKSIRN-GKANLRDGYCSFRD
-GEILLLNVHISPHKNVGSF-FNHDPLRNRKLLLHKKEIIKLKSNTEKKGMTIVPLSMYL-KGSWIKLTLGV
GKGKKLHDKRQDEKQKSIKKEINSVLK-R------------------------------
>YP_001010216|1-164 tmRNA binding protein SmpB [Prochlorococcus marinus str. AS9601].
-------------------------------------------------------------MAKNSNKVKKN
TNKANNFK--------------LLADNRYAKFQYAIS-ETIEAGIELLGTEVKSIRN-GKANLRDGYCSFRD
-GEILLLNVHISPHKNVGSF-FNHDPLRNRKLLLHKKEIIKMKSNTEKKGMTIVPLSLYL-KGSWIKLTIGV
GKGKKLHDKRQDEKQKSIKKEINSALK-R------------------------------
>NP_893733|1-175 SsrA-binding protein [Prochlorococcus marinus subsp. pastoris str. CCMP1986].
--------------------------------------------------MFFGERFFTTAMAKVSNKANKI
IKKEAVFK--------------RLSENRYAKFQYEIL-ETIEAGIELLGTEVKSIRN-GSVNLRDGYCSFRD
-GEILLLNVHISPHKNVGPF-FNHDPLRNRKLLLHKKEIVKLKYNTEKKGLTIIPLSIYL-KGSWIKLTIGI
GKGKKLHDKRQADKQRDIKREIKTALK-R------------------------------
>YP_001012119|1-165 tmRNA binding protein SmpB [Prochlorococcus marinus str. MIT 9515].
------------------------------------------------------------MIAKVSNKSNKS
NKKEAVFK--------------RLAENRYAKFQYEIS-ETIEAGIELLGTEVKSIRN-GNVNLRDGYCSFRD
-GEILLLNVHISPHKNVGSF-FNHDPLRNRKLLLHKKEIFKLKSNTEKKGLTIIPLSIYL-KGSWIKLTIGI
GKGKKLHDKRQADKQKDIKREIKTALK-R------------------------------
>ABM76624|1-165 tmRNA binding protein SmpB [Prochlorococcus marinus str. NATL1A].
-------------------------------------------------------------MSKKGKKKSKN
NSSVDGNR--------------RLAENRQARYEYEIL-ETLETGLELLGTEVKSIRA-GKVNLKDGFCLIKK
-DQIQLHNVHISPHNHAGKF-FNHEPLRIKRLLAHRKEIEKLKISLERKGLTIIPLSLYL-KGSWIKLKIGV
GKGRKTHDKRDREKINDSKRDVANALK-RF-----------------------------
>YP_292386|1-165 SsrA-binding protein [Prochlorococcus marinus str. NATL2A].
-------------------------------------------------------------MSKKGKKQSKN
NSSVDGNR--------------RLAENRQARYEYEIL-ETLETGLELLGTEVKSIRA-GKVNLKDGFCLIKK
-DQIQLHNVHISPHNHAGKF-FNHEPLRIKRLLAHRKEIEKLKISLERKGLTIIPLSLYL-KGSWIKLKIGV
GKGRKIHDKRDREKINDSKRDVANALK-RF-----------------------------
>ZP_01471671|1-221 SsrA-binding protein [Synechococcus sp. RS9916].
MAAQQTLKERASPCGPAAFWPRRTQSPWVERTERNGWMGGQSPLGSVQERQQHSVMAKGPGRRGNGGKDDKD
K-----PR--------------ILADNRFARHQYDIL-ETLETGVELLGTEVKSVRA-GQTNLRDGFCLIRN
-GQMQLHNVHISPHTHAGSY-FNHDPLRVRRLLAHRKEINKLRIELDQKGLTLVPLNLHL-KGSWIKLTIGL
CKGRKLHDKRAAEKEKQTKKETRAALS-RY-----------------------------
>NP_876167|1-165 SsrA-binding protein [Prochlorococcus marinus subsp. marinus str. CCMP1375].
------------------------------------------------------------MSKARNNKKSKL
S-KAKSNR--------------RLAENRYARHQYEIL-EDIEAGIELLGTEVKSIRA-GNVNLRDGFCLIRE
-GSLLLHNVHISPFNNAGSF-FNHEPLRVRKLLAHRKEINKLETQVNRKGLTLVPLNIFL-KGSWIKITIGL
GKGRKLHDKRENEKRKQSEREVKSALA-RY-----------------------------
>ZP_01006420|1-166 SsrA-binding protein [Prochlorococcus marinus str. MIT 9211].
------------------------------------------------------------MTKKKNKKVTKS
E-RGEANR--------------RLAENRLARHQYEIL-ETLETGIELVGTEVKSIRA-GNTNLRDGFCLIRE
-GELQLHNVHISPLNNAGNF-FNHDPLRTRKLLAHRKEINKLEIQVARKGLTLIPLSIHL-KGSWIKIIIGV
GKGRKLHDKREDDKRKQANRDMKSALA-RYR----------------------------
>ZP_01084826|1-165 SsrA-binding protein [Synechococcus sp. WH 5701].
------------------------------------------------------------MAKGAGKKAARA
A-RDASNR--------------LLADNRFARHQYEIL-ETLETGIELVGTEVKSIRA-GKANLRDGFGLIRN
-GELQLHNVHISPHSHAGAY-FNHEPLRTRKLLAHRREIDKLRVALDQKGLTLVPLNLHL-KGSWIKLTLGL
AKGRKLHDKRQEERRKDADREVRSALA-RL-----------------------------
>ABM76947|1-165 tmRNA binding protein SmpB [Prochlorococcus marinus str. MIT 9303].
------------------------------------------------------------MAKGGNKKATAA
A-RAAANR--------------LLADNRLARHQYEIL-DTLETGIELVGTEVKSIRA-GQANLRDGFCLIRK
-GELQLHNVHISPHSHAGSY-FNHDPLRTRKLLAHRREIDKLRGQLDRKGLTLIPLNLHL-KGSWIKLTIGL
GKGRKLHDKRQEEKRKQADREVKSALA-RY-----------------------------
>NP_893988|1-165 SsrA-binding protein [Prochlorococcus marinus str. MIT 9313].
------------------------------------------------------------MAKGGNKKATAA
A-RAAANR--------------LLADNRLARHQYEIL-DTLETGIELVGTEVKSIRA-GQANLRDGFCLIRK
-GELQLHNVHISPHSHAGSY-FNHDPLRTRKLLAHRREIDKLRGQLDRKGLTLIPLNLHL-KGSWIKLTIGL
GKGRKLHDKRQDEKRKQADREVKSALA-RY-----------------------------
>NP_896229|1-166 SsrA-binding protein [Synechococcus sp. WH 8102].
------------------------------------------------------------MAKGGAKKAAAA
AARAAANR--------------MLADNRQARHQYEIL-ETLETGIELVGTEVKSIRN-GKANLRDGFCLIRN
-GELQLHNVHISPHSHAGAY-FNHDPLRTRKLLAHRREIDKLRGQLDQKGLALIPLNIHL-KGSWIKLTIGL
GKGRKLHDKRAAEKEKQSKKEVKAAIA-RF-----------------------------
>ZP_01468943|1-166 SsrA-binding protein [Synechococcus sp. BL107].
------------------------------------------------------------MAKGGVKKAAAA
AARAAANR--------------LMADNRQARHQYEIL-ETLETGIELVGTEVKSIRN-GKANLRDGFCLIRN
-GELQLHNVHISPHSHASAY-FNHDPLRTRKLLAHRREIDKLRGQLEKKGLALIPLNIHL-KGSWIKLTVGV
GKGRKLHDKRAADKEKQTKKDVRSALK-NF-----------------------------
>YP_376179|1-167 SsrA-binding protein [Synechococcus sp. CC9902].
------------------------------------------------------------MAKGGVKKAAAA
AARAAANR--------------LMADNRQARHQYEIL-ETLETGIELVGTEVKSIRN-GKANLRDGFCLIRN
-GELQLHNVHISPHSHASAY-FNHDPLRTRKLLAHRREIDKLRGQLDKKGLALIPLNIHL-KGSWIKITIGV
GKGRKLHDKRAADKEKQSKKEVRSAMA-KYQ----------------------------
>NP_924440|1-152 SsrA-binding protein [Gloeobacter violaceus PCC 7421].
-------------------------------------------------------------------MAGEK
T-----RK--------------ILVDNRKARFEYEIL-ETYSAGLALLGTEVKAIRA-GRANLNDAFARIHH
-GEVLLYNMNISPLQTAGA--FAHDPLRTRKLLLKRREIHKLTGRVEEKGLTLIPLKLYL-EGSWVKLDLGL
ARGKKLYDKREDIKKRETKRDIERAMR-R------------------------------
>YP_477502|1-154 SsrA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)].
-------------------------------------------------------------------MAVDP
N-----VK--------------TLVDNRRARFEYDIL-ETYEAGIQLTGTEVKSIRA-GKANLQDAFALFRD
-GEAWLHNLHISPHDTASKV-FNHDPTRRRKLLLHRREIDRLRGLVEQKGLTVVPLKLVL-NRGWIKAHLGV
ARGKKLHDKRQAIKERQTQREIQRELK-ER-----------------------------
>YP_474665|1-154 SsrA-binding protein [Synechococcus sp. JA-3-3Ab].
-------------------------------------------------------------------MAVDP
N-----VK--------------TLVENRRARFEYEIL-ETYEAGIQLTGTEVKSIRA-GKANLQDAFALFRD
-GEAWLHNLHVAPHGTASKV-FNHDPTRRRKLLLHRREIDRLRGLVEQKGLTVVPLRLVL-NRGWIKAHLGV
ARGKKLHDKRQAIKERETRREIQRELK-GR-----------------------------
>YP_722035|1-156 SsrA-binding protein [Trichodesmium erythraeum IMS101].
-----------------------------------------------------------------MAKKSGE
G-----QK--------------IISDNRQARFNYHII-ETYEAGVALQGTEVKSIRE-GKVNLRDGYALIRN
-NEAWLLNVHISPYQKAGDF-FNHEPRRSRRLLLHKQEIRKLIGKVEQQGLTLVPLRMYF-KRGWVKVDIAL
AQGKKLYDKRETIKRRDDKRAMQRAIK-QY-----------------------------
>ZP_01622993|1-155 SsrA-binding protein [Lyngbya sp. PCC 8106].
-----------------------------------------------------------------MSKNDSG
G-----RK--------------IITDNRKARYLYELL-ETYQAGIELQGTEVKSIRA-GRVNMQDGYALVRN
-REAWLINVHISPYET-SAY-FNHEPRRTRKLLLHRKEINKLIGLVEQKGLTLVPTKMYF-KNGLVKVEIAV
GRGKKLHDKRDTMKKRDDQRQMERAMK-QY-----------------------------
>NP_682717|1-152 SsrA-binding protein [Thermosynechococcus elongatus BP-1].
---------------------------------------------------------------------MGD
S-----IK--------------VLSENRQARFQYEIL-ETYECGLVLLGTEVKSIRA-GKVNLRDGFARIRN
-GEAWLMNVHISPHESTNPS-YNHDPLRDRKLLLHKQEIRKLVGKVEQKGLTLVPLKLYL-KNGRVKVSLGL
ARGKKLHDKRQDLKQRQDKREMERAMK-QR-----------------------------
>YP_173008|1-154 SsrA-binding protein [Synechococcus elongatus PCC 6301].
-------------------------------------------------------------------MADSG
G-----IK--------------VLSENRQARFQYEIL-ETFETGIELLGTEVKSIRA-GKVNLRDGFALVRN
-GEVWLHNIHISPHQQASAY-YNHDPLRTRKLLMHREEIRKLIGKVEQKGLTLVPLKMYL-KQGWVKVTLGL
GRGKKLHDKRETERRRQDQRDIQRAIK-RA-----------------------------
>NP_441770|1-154 SsrA-binding protein [Synechocystis sp. PCC 6803].
------------------------------------------------------------------MAKEKE
R-----IK--------------VVSDNRQARFLYEIL-ETYEAGIELQGTEVKSIRA-GKVNLRDGFALLRD
-GEVWLMNVHISPYDKSSLF-FNHDPRRTRRLLMHNWEIRKLIGQVEQKGLTLVPLKMYF-KGSWVKVALGL
GKGKKLHDKRETLKRRQDDRDMARAMK-R------------------------------
>ZP_00514571|1-155 SmpB protein [Crocosphaera watsonii WH 8501].
------------------------------------------------------------------MGNENK
A-----TK--------------IISDNRKARFLYEIL-ETYEAGIELVGTEVKSIRA-GRVNLADGYAFIKD
-GEAWLTNVHISPYQGSSQY-FNHEPKRTRKLLLHRKEINQLIGKIEQKGLTLVPLKLYF-KGSRVKVGIGL
GKGKKLHDKRETVKRRQDQREMSRAMK-RY-----------------------------
>ZP_00106944|1-155 COG0691: tmRNA-binding protein [Nostoc punctiforme PCC 73102].
------------------------------------------------------------------MSDKNE
G-----YK--------------VIADNRQARYLYEIL-ETYEAGIELTGTEVKSIRA-GKVNLQDGYALLRN
-GEAWLINIHISPYNASGQY-FNHEPRRTRKLLLHRQELRKLIGKVEQQGLTLIPLKMYL-KRGWVKVSIAL
GKGKKLHDKREDLKRRQDQRDIQRAMK-SY-----------------------------
>ZP_01630717|1-155 SsrA-binding protein [Nodularia spumigena CCY9414].
------------------------------------------------------------------MSEKSQ
S-----YK--------------VISDNRQARYLYEIL-ETFEAGVELTGTEVKSIRA-GRVNLQDGYALIRN
-GEAWLINVHISPYNASGQY-FNHEPRRTRKLLLHRQEIRKLIGKVEQEGLTLVPLKMYL-KRGWVKVSIAL
GKGKKLHDKRESLKRRQDQRDMQRAMK-NY-----------------------------
>NP_489110|1-155 SsrA-binding protein [Nostoc sp. PCC 7120].
------------------------------------------------------------------MSDKSE
S-----YK--------------VITDNRQARYLYEIL-ETFEAGIQLTGTEVKSIRA-GKVNLQDGYALLRD
-GEIWLINAHISPYNASGQY-FNHEPRRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKMYL-KRGWVKVSIAL
GKGKKLHDKRESLKRRQDQRDMQRAMK-NY-----------------------------
>YP_322838|1-155 SsrA-binding protein [Anabaena variabilis ATCC 29413].
------------------------------------------------------------------MSDKSE
S-----YK--------------VITDNRQARYLYEIL-ETFEAGIQLTGTEVKSIRA-GKVNLQDGYALLRD
-GEIWLINAHISPYNASGQY-FNHEPRRTRKLLLHRQEIRKLIGKVEQQGLTLVPLKMYL-KRGWVKVSIAL
GKGKKLHDKRESLKRRQDQRDIQRAMK-NY-----------------------------
>NP_213200|1-157 SsrA-binding protein [Aquifex aeolicus VF5].
-------------------------------------------------------------------MGKSD
K-----II--------------PIAENKEAKAKYDIL-ETYEAGIVLKGSEVKSLREKGTVSFKDSFVRIEN
-GEAWLYNLYIAPYKH-ATI-ENHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYW-KNNKVKVLIAL
AKGKKLYDRRRELKEKAMKRELEREFK-GKIHL--------------------------
>YP_056062|1-160 SsrA-binding protein [Propionibacterium acnes KPA171202].
-------------------------------------------------------------------MPREQ
G-----VR--------------VVARNRRATHDYTIG-DTWEAGLVLQGTEVKSLRA-GKATLTDAFAQVDE
RGEVWMYNLHIPEYAF-GTW-RNHDVMRKRKLLLNKREIAKLSREADGPGKTIVPLQLYF-KDGYAKVEIAV
GTGKRDWDKRQAIRERDAKREAQRALA-NRVRNRKR-----------------------
>YP_832141|1-156 SsrA-binding protein [Arthrobacter sp. FB24].
-------------------------------------------------------------------MPKES
G-----RK--------------VVATNRKARHDYHVL-DTYEAGIALMGTEVKSLRE-GHASMVDGFCTFYN
-DELWMEGIHIPEYNQ-GSW-TNHSARRRRKLLLHREELTKISHKIRESGFTIVPLQLYF-LDGKAKVEIGV
ARGKKEYDKRQTLREQQDKREALRVMR-ERNRG--------------------------
>YP_948369|1-156 SsrA-binding protein [Arthrobacter aurescens TC1].
-------------------------------------------------------------------MPKES
G-----RK--------------VVATNRKARHNYHVM-DTYEAGIALMGTEVKSLRE-GHASMVDGFCTFYN
-DELWMEGIHIPEYHQ-GSW-TNHAARRRRKLLLHRDELDKISQKIRESGFTVVPLQLYF-LDGRAKVEIAI
ARGKKDYDKRQTLREQQDKRESLRELR-ERNRR--------------------------
>ZP_00993557|1-164 SsrA-binding protein [Janibacter sp. HTCC2649].
----------------------------------------------------------MTAVVKTAKKKEDD
G-----RK--------------LIASNKKARHDYLIE-DTFEAGLVLMGTEVKALRM-GRATLVDGWASFTG
-DELFLEGVHIPEYLS-GSW-TNHTPRRRRKLLLNRKELDRIMHKTRESGHTIVPLQLYF-KDGRAKVEIAI
AKGKKEYDKRHALRERQDRRETERELG-ANRG---------------------------
>ZP_00380971|1-156 COG0691: tmRNA-binding protein [Brevibacterium linens BL2].
-------------------------------------------------------------------MPKET
G-----KK--------------VIARNRKARHDYLIE-DTWEAGLVLSGTEVKSLRE-GRASLTDGFALIFQ
-NEAWLEGVYIPEYAQ-GTW-TNHTARRRRKLLLHRDEILRLSQKVKESGRTLIPLELYF-DGSRVKVEIAL
AKGKREWDKRQALREAQDKREAERAIK-SKQFL--------------------------
>YP_909330|1-159 SsrA-binding protein [Bifidobacterium adolescentis ATCC 15703].
-------------------------------------------------------------------MAKEQ
G-----TK--------------PIAQNKKARHDYAIE-DKYEAGLVLTGTEVKSLRE-GRASLAESFITIDR
RGEMWLEGANIPEYLN-GTW-NNHAPKRKRKLLLHAAQIDKLARQTQAKGFTIIPLSLYF-KDGRVKVEIAL
ARGKKEFDKRQSLREEQDKREALRAMR-YANKQVR------------------------
>NP_696349|1-199 SsrA-binding protein [Bifidobacterium longum NCC2705].
--------------------------MKRNPFRIRGRSVISSDVALLPTSCYPRVATHELLPTKGGDMPKET
G-----EK--------------LIVQNKKARHDYAIE-DKYEAGLALTGTEVKSLRE-GRASLSEAFISIDR
RGEMWLEGANIPEYLN-GTW-NNHAPKRKRKLLLHRLQITKLARGIEAKGYTIVPLSLYF-KDGRVKAEIAL
ARGKKEFDKRQALREEQDKREALRAMR-YANMRH-------------------------
>ZP_00121019|1-158 COG0691: tmRNA-binding protein [Bifidobacterium longum DJO10A].
-------------------------------------------------------------------MPKET
G-----EK--------------LIVQNKKARHDYAIE-DKYEAGLALTGTEVKSLRE-GRASLSEAFISIDR
RGEMWLEGANIPEYLN-GTW-NNHAPKRKRKLLLHRLQITKLARGIEAKGYTIVPLSLYF-KDGRVKAEIAL
ARGKKEFDKRQALREEQDKREALRAMR-YANMRH-------------------------
>YP_120695|1-160 SsrA-binding protein [Nocardia farcinica IFM 10152].
-----------------------------------------------------------------MTVMKEK
G-----RK--------------VIATNRRARHNYTIL-DTYEAGIVLVGTEVKSLRE-GKASLVDAFATVDN
-GEVWLRGLHIPEFSH-GTW-TNHSPRRVRKLLLHKREIERLVGKSREGNQTLVPLSMYF-SDGKVKVELAL
ARGKQDYDKRQDLARRTAEREVTRELG-RRVKGMR------------------------
>YP_706343|1-157 SsrA-binding protein [Rhodococcus sp. RHA1].
--------------------------------------------------------------------MKEK
G-----RK--------------VIATNRKARHNYTIL-DVYEAGIALVGTEVKSLRE-GKASLVDAFATVDD
-GEVWLRSLHIPEYTQ-GTW-TNHAPRRTRKLLLHKQEIEHLVGKTREGNQTLVPLSMYF-SDGKVKVELAL
AKGKQDYDKRQDLARRTAEREVTRELG-RRVKGMR------------------------
>YP_886451|1-161 SsrA-binding protein [Mycobacterium smegmatis str. MC2 155].
----------------------------------------------------------------MTKKSASS
N-----NK--------------VVATNRKARHNYTIL-DTYEAGIVLMGTEVKSLRE-GQASLADAFATVDD
-GEIWLRNVHIAEYHH-GTW-TNHAPRRNRKLLLHRKQIDNLIGKIRDGNLTLVPLSIYF-TDGKVKVELAL
ARGKQAHDKRQDLARRDAQREVIRELG-RRAKGKI------------------------
>ZP_01275825|1-168 SmpB protein [Mycobacterium sp. JLS].
---------------------------------------------------------MAAKKAGKAGATKDR
N-----NQ--------------VVASNRRARHNYAIL-DTYEAGIALMGTEVKSLRD-GQASLADAFATVDD
-GEIWLRNLHIPEYQH-GSW-TNHAPRRNRKLLLHRREIDNLIGKIRDGNLTLVPLSLYF-TGGKVKVELAL
ARGKQAHDKRQDLARRDAEREVVRELG-RRAKGMS------------------------
>YP_952742|1-165 SsrA-binding protein [Mycobacterium vanbaalenii PYR-1].
-------------------------------------------------------------MAKKPKAVKDS
N-----NQ--------------VVATNRKARHNYSIL-DTYEAGIALMGTEVKSLRE-GQASLADAFATVDD
-GEIWLRNLHIPEYHH-GTW-TNHAPRRNRKLLMHRREIDNLVGKIRDGNLTLVPLSLYF-TGGKVKVELAL
ARGKQAHDKRQDMARRDAQREVTRELG-RRVKGMTS-----------------------
>ZP_01190479|1-165 SmpB protein [Mycobacterium flavescens PYR-GCK].
-------------------------------------------------------------MAKKPKSVKDT
N-----NM--------------VVASNRKARHNYSIL-ETYEAGVALVGTEVKSLRD-GTASLADAFATVDD
-GEIWLRNLHIPEYHH-GSW-TNHAPRRNRKLLMHRREIDNLVGKIRDGNLTLVPLSLYF-TGGKVKVELAL
ARGKQAHDKRQDMARRDAQREVTRELG-RRVKGMTN-----------------------
>NP_962104|1-169 SsrA-binding protein [Mycobacterium avium subsp. paratuberculosis K-10].
-------------------------------------------------------------MAKGSGRAKAA
GGKGGSKQ--------------IIATNRKARHNYSII-ETYEAGVALQGTEVKSLRE-GQASLADAFATIDD
-GEVWLRNLYIPEYQH-GSW-TNHDPRRNRKLLLHRQQIDRLVGKIRDGNLALMPLSLYF-SEGKVKVELAL
ARGKKAYDKRQDLAQRDAQREVVRQLG-RRTKGMI------------------------
>YP_906231|1-168 ssRNA-binding protein SmpB [Mycobacterium ulcerans Agy99].
--------------------------------------------------------------MAAQSKQAKP
SGKQGGKK--------------IIATNRKARHNYSII-EVFEAGVALQGTEVKSLRE-RHASLVDAFATVDD
-GEVWLRNLHIPEYLH-GTW-TNHEPRRNRKLLLHRRQIDTLFGKIREGNFALVPLSMYF-LDGKVKVELAL
ARGKHAHDKRQDLARRDAQREVIRELG-RRAKGMG------------------------
>NP_301544|1-160 SsrA-binding protein [Mycobacterium leprae TN].
-----------------------------------------------------------------MARNPRG
G-----KQ--------------IVATNRKARHDYAII-ELFEAGVALLGTEVKSLRE-GHASLADAFATVDS
-GEVWLRNMHIPEYQH-GSW-TNHDPRRNRKLLLHRRQIDTLVGKIRDGNLALVPLSLYF-AEGKVKVELAL
ARGKKLHDKRQDMARRDAQREVIRELG-RRAKGML------------------------
>NP_217616|1-160 SsrA-binding protein [Mycobacterium tuberculosis H37Rv].
-----------------------------------------------------------------MSKSSRG
G-----RQ--------------IVASNRKARHNYSII-EVFEAGVALQGTEVKSLRE-GQASLADSFATIDD
-GEVWLRNAHIPEYRH-GSW-TNHEPRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYF-AEGKVKVELAL
ARGKQARDKRQDMARRDAQREVLRELG-RRAKGMT------------------------
>CAA49621|1-160 SmpB [Mycobacterium tuberculosis H37Rv].
-----------------------------------------------------------------MSKSSRG
G-----RQ--------------IVARNRKARHNYSII-EVFEAGVALQGTEVKSLRE-GQASLADSFATIDD
-GEVWLRNAHIPEYRH-GSW-TNHEPRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYF-AEGKVKVELAL
ARGKQARDKRQDMARRDAQREVLRELG-RRAKGMT------------------------
>YP_250233|1-184 hypothetical protein jk0458 [Corynebacterium jeikeium K411].
-------------------------------------------------------------MAAKKSTPTDS
GKSKGKKNKAQKGAGQKGAGQIVVATNRKARHDYHII-DTYECGVVLVGTEVKSLRE-GKASLVDAYATIDE
-GEVWLRGLHIPEYSM-GHW-TNHSPRRTRKLLLHRREIDSLMGKVRDGNNTLVPLQLYF-VAGKLKVELAL
ARGKQEYDKRQDIKRRTEEREITREMG-RRIKGIQG-----------------------
>NP_939123|1-163 SsrA-binding protein [Corynebacterium diphtheriae NCTC 13129].
---------------------------------------------------------------MAKKKKAKN
S-----NP--------------VIASNRKARHDYKIL-DTFECGIVLLGTEIKSIRE-GKVSLTDSFATIDE
-GEAWIRNLNIPIYSR-GSW-TNHSPMRTRKLLLHRREIDSLMGKVRDGNKTLVPLSLYF-KEGRLKVELGL
AQGKQDYDKRQDIKRRTEEREVVRDLG-RRVKGIHA-----------------------
>NP_737424|1-164 SsrA-binding protein [Corynebacterium efficiens YS-314].
--------------------------------------------------------------MAKKKKKVDE
N-----NQ--------------VLATNRKARHDYQIL-DTWEAGVVLLGTEIKSLRE-GKASLVDAFAVIDN
-GEVWLHNLHIPTYSM-GSW-TNHSPKRTRKLLLHRREIDSLMGKVRDGNRTLVPLKLYL-VNGRVKLELGL
AQGKQDYDKRQDIKRRTEEREVTRELG-RRIKGINA-----------------------
>NP_600033|1-164 SsrA-binding protein [Corynebacterium glutamicum ATCC 13032].
--------------------------------------------------------------MAKKKKKVDE
N-----NS--------------VLATNRKARHDYHII-DTWEAGVVLLGTEIKSLRE-GKVSLVDSFATIDN
-GEIWLQHLHIPQYSM-GSW-TNHTPKRTRKLLLHRNEIDSLMGKVRDGNRTLVPLKLYL-KNGRVKLELGL
AQGKQDYDKRQDIKRRTEEREVTRELG-RRIKGINA-----------------------
>YP_062284|1-158 SsrA-binding protein [Leifsonia xyli subsp. xyli str. CTCB07].
-------------------------------------------------------------------MAKER
G-----QK--------------VVATNRRARHDYTIE-DTYEAGLVLTGTEVKSLRL-GRASLVDGYAFVDG
-GEAWLDAVHIPEYAD-GTW-NNHAPRRKRKLLLHKAQILKIESKVKQGGYTIVPLQIYF-NDGRAKVEIGV
AKGKREYDKRQALRERQDNREAQRAMA-SRKHLGE------------------------
>ZP_01131020|1-159 SsrA-binding protein [marine actinobacterium PHSC20C1].
-------------------------------------------------------------------MPKEG
D-----RK--------------VVASNRKARHDYSIE-DTFEAGLVLSGTEVKSLRL-GRASLIDGYGYIDD
HAEAWLDAVHIPEFFQ-GSW-NNHPPRRKRKMLLHKEQILKIHNKIKQGGYTLVPLSIYF-LDGRAKVELAV
AKGKREYDKRQTLRERQDKRESDRAIS-ARKNMGE------------------------
>BAE97631|1-173 SsrA binding protein [Agromyces sp. KY5R].
----------------------------------------------------MSADPAPARRQKGCDMPKET
G-----EK--------------LIASNKKARHEYNIL-DTYEAGLVLTGSEVKSLRM-GRASLVDGYVFIER
-GEAWLDAAYIPEYLN-GSW-TNHAPRRKRKLLLHRQQIDKLYQKTREGGMTIVPLRLYF-LDGRAKVEIAL
AKGKKEYDKRQTLRERQDKREAERAMR-SKNRLGE------------------------
>BAE97620|1-159 SsrA-binding protein [Agromyces sp. KY5R].
------------------------------------------------------------------MSPKET
G-----EK--------------LIASNKKARHEYHIL-DTYEAGLVLTGSEVKSLRM-GRASLVDGYVFIER
-GEAWLDAAYIPEYLN-GSW-TNHAPRRKRKLLLHRQQIDKLYQKTREGGMTIVPLRLYF-LDGRAKVEIAL
AKGKKEYDKRQTMRERQDKREAERAMR-TRNRMGE------------------------
>ZP_01431511|1-159 SsrA-binding protein [Salinispora tropica CNB-440].
-------------------------------------------------------------------MPREK
G-----RK--------------VVASNRKARHDYSIL-DTYEAGMALTGTEVKSLRA-GRASLVDAFAQERN
-GELYLHGMHIPEYVQ-GTW-TNHEPRRTRKLLLNRIEIDRLIGKTRESGLTIVPLQVYF-SDGWAKVEIGV
AKGKKSYDKRQDLAKRDAQREIARAAG-RRGKGMAD-----------------------
>ZP_01649576|1-159 SsrA-binding protein [Salinispora arenicola CNS205].
-------------------------------------------------------------------MPREK
G-----RK--------------VVASNRKARHDYSIL-DTYEAGMALTGTEVKSLRA-GRASLVDAFAQERN
-GELYLHGMHIPEYVQ-GTW-TNHEPRRTRKLLLNRTEIDRLIGKTRESGLTLVPLQVYF-SDGWAKVEIGV
AKGKKAYDKRQDLAKRDAQREMARAAG-RRSKGMDD-----------------------
>YP_922473|1-159 SsrA-binding protein [Nocardioides sp. JS614].
-------------------------------------------------------------------MAKEQ
G-----RK--------------LIAQNKKARHDYHIE-DTYEAGLVLQGTEVKSLRQ-GRASLVDGFVDIDR
-GEAWLHGVHIPEYSQ-GTW-TNHAARRKRKLLLNRDEIDKIERRVNEKGLTVVPLALYF-KDGRAKVEIAL
AKGKKSWDKRAALAERQANRETEQAVG-RRLKGMHD-----------------------
>NP_627190|1-159 SsrA-binding protein [Streptomyces coelicolor A3(2)].
----------