>S51485/1-328 hybridoma antibody H chain variable region=influenza virus A/PR/8/34 hemagglutinin-specific [mice, BALB/c, Genomic, 328 nt]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------C---------------------- ------------------------------------------------------------------------ --------------------------------------------CT-G----------------GCCTCGTG AAACC---------TTC-TC-AGTC----------------TCTGTCTCTCACCTGCTCTGTCA----CTGG CTACTCCATCA------CCAGT----GGTT-------------------------ATTACTGGA---ACTGG ATC----CG-GCA------GTTTCCAGGAAACAAA---CTGGAATGGATGGGCTACA-----TAAGCTACGA CGGTAGCAATAACTACAACCCATCTCT----CAAAA-ATCGAATCTC-C----ATCACTCGTGACACATCTA AGAACCAGTTT---------------------------------TTCCTGAAGTTGAATTCTGTGACTA--C TGAGGACA----------------------------------------CAGCTAC----------------- --------ATATTACTGTGCAAG-----AGGCCCCCCTATACCATACTTTGACTACTGG------------- -------------------------GGCCAAGGCACCACTCTCACAGTCTCC---T---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00782264/1-284 conserved hypothetical protein [Streptococcus agalactiae H36B]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------TLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LVTDE-N--KDF--YFI------------------------QKDGFTFALSKS------EGEH-----HIGE MVKGFAYTDIQ---------------QKAR----LTTKET----FATRDHYGWGTVTEVRKDLG-VFLDTGL PDK-------QVV-VSLD-----VLPEL----------KELWPKKGDRL-YVCLDVD-----KKDR---LWA LPA--DPEVFQQMATPAYNNMQNQNWP----AIVYR-LKLSGTFVYLPE----NNMLGFIHPSE----RYSE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMILTYLESNGGFMTLNDKSS-----P EEIKATFGISKG--QFKKA---------LGGLMKAKKIKQD-------QLGTELL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_688505/1-284 hypothetical protein SAG1511 [Streptococcus agalactiae 2603V/R]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------TLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LVTDE-N--KDF--YFI------------------------QKDGFTFALSKS------EGEH-----HIGE MVKGFAYTDMQ---------------QKAR----LTTKET----FATRDHYGWGTVTEVRKDLG-VFLDTGL PDK-------QVV-VSLD-----VLPEL----------KELWPKKGDRL-YVCLDVD-----KKDR---LWA LPA--DPEVFQRMATPAYNNMQNQNWP----AIVYR-LKLSGTFVYL-PE---NNMLGFIHPSE----RYSE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMILTYLESNGGFMTLNDKS-----SP EEIKATFGISKG--QFKKA---------LGGLMKAKKIKQD-------QLGTELL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_268757/1-285 hypothetical protein SPy0464 [Streptococcus pyogenes M1 GAS]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------HKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIE---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHSSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKS-----SP EEIKASFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_059724/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS10394]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----MLPEM----------KELWPKKGDKLYIR-LEVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYL-PE---NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKAAFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_601874/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS10750]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QVGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEIRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYL-PE---NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKAIFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_596113/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS9429]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKL-YISLDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_279836/1-285 s1 RNA binding domain [Streptococcus pyogenes MGAS6180]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------M----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYTDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKS-----SP EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_597991/1-285 S1 RNA binding domain [Streptococcus pyogenes MGAS10270]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LEVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_606726/1-285 hypothetical protein spyM18_0507 [Streptococcus pyogenes MGAS8232]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKSS-----P EEIKAIFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_802791/1-285 hypothetical protein SPs1529 [Streptococcus pyogenes SSI-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------DLL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------A--TVITG LIKEE-N--AND--YFI------------------------QKEGFTFTLSKA------EGER-----QIGD MVTGFAYIDIK---------------QKAR----LTTKEI----RSTRTSYGWGEVTEVRRDLG-VFVDTGI PNK-------EIV-VSLD-----VLPEM----------KELWPKKGDKLYIR-LDVD-----KKDR---IWG LPA--EPEVFQKMASPAYNNMQNQHWP----AIVYR-LKLTGTFVYLPE----NNMLGFIHPSE----RYAE P----RLGQVL-DARVIGFREVDRTLNLSLKPRSFE--MLEND-AQMIVTYLEANGGFMTLNDKS-----SP EEIKATFGISKG--QFKKA---------LGGLMKAKRIKQDATGTEL------------------------- ---------------------IG------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01179377/1-284 RNA binding S1 [Bacillus cereus subsp. cytotoxis NVH 391-98]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------FK-- ------------------------------------------------------------------------ -----------------------------------------------P----------------G--SIEQV TVLRQ-T--EIG--YMV-----GHD----------------EEEVF-LHKNEV------AGDI-----EEGD TIDVFFYLDHQ--------ERI----AATM------KTPL-------ITTSDWNWVKVV--------EVKER L---------GVF-VDIGVSKDILVPADEFPIY-----TPVWPEVGDEL-YCTLKLT-----KRGR-LIALP ARDADMQEIVVEATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTER------- -KEQVRIGQRV-TGRIIDV-KEDGTINISLLPRKEE--GIEDD-ATVIYEYMESRGGAMPFWDKSY-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EGKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01183194/1-284 RNA binding S1 [Bacillus weihenstephanensis KBAB4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------L----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEL------AGEI-----AEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTHDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPLDEFPIY-----MPVWPQEGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIIVDATPSMRN----KNVN----GRVYR-SLQVGSFILT-D----EHFRAFLHHTER------- -KEQVRIGERV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVLYAYMEERGGAMPFWDKSN-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKIY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_830946/1-282 S1 RNA binding domain [Bacillus cereus ATCC 14579]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MQI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVDATPSMRN----KNVN----GRVYR-SLQVGSFILT-D----EHFRAFLHHTER------- -KEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSH-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00741116/1-284 S1 RNA binding domain [Bacillus thuringiensis serovar israelensis ATCC 35646]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIIVDATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTER------- -KEQVRIGERV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSH-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_977595/1-284 hypothetical protein BCE_1274 [Bacillus cereus ATCC 10987]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVDATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTER------- -KEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSY-----P EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00391498/1-284 COG2996: Uncharacterized protein conserved in bacteria [Bacillus anthracis str. A2012]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRE-T--EIG--YMV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVEATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTE-------- RKEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKSY-----P EDIKERFNMSKA--AFKRA---------LGKLMX--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_843646/1-284 hypothetical protein BA1167 [Bacillus anthracis str. Ames]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MY----------------- ------------------------------------------------------------------------ --------------------------------------------------------------------LQ-- ------------------------------------------------------------------------ -----------------------------------------------I----------------G--SIEQV TVLRETE--IGY---MV-----GNE----------------EEEIF-LHKNEV------AGEI-----EEGD TIDVFLYLDHQ--------NRI----SATM------KEPI-------ITTYDWNWVK----------VVEVI PSL-------GVF-VDIGVSKDILIPADEFPIY-----MPVWPEVGDEL-YCTLKLT-----NRDR-LIALP ARDSDMQEIVVEATPSMRN----KNVN----GRVYR-SLQVGSFVLT-D----EHFRAFLHHTE-------- RKEQVRIGQRV-TGRIIDV-KDDGTINISLLPRKEE--GMEDD-AAVIYAYMEERGGAMPFWDKS-----YP EDIKERFNMSKA--AFKRA---------LGKLMK--------EEKVY---------------QEEGWTYFKK ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_090796/1-282 YitL [Bacillus licheniformis ATCC 14580]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------MK-P----------------G--QQLTL KIDHKAD--YGY--FLT-D---G------------------ETAVL-LHQSEI------TEDI-----DGRE EVDVFLYVDHE--------DRL----AATMRKPIISAEQY-----------GWVEVVD-------------- -----AVSGMGVF-VDVGLSKDALVATEHLPPY-----ESVWPQKGDRL-YCMLKIT------GHG------ -RMFAKPAPEDKISELFTEASPGLMNK-ELTGTIYR-LIASGSFMIS-E----AGIRGFIHSSE----RKEE P----RLGEKL-TARVIKV-KEDGSVNLSLLPRKQD--ALSVD-AEQILTYMRSRNGAMPFWDKS-----DP EDIRERFNMSKA--AFKRA---------LGHLMKQDKIY-----------------------QEEGW----- ------------------------------------------------------------------------ --------------------TY-------------------------------------------------- ----------------------------------------------------------EKK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >CAA70667/1-282 YitL [Bacillus subtilis]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------MR-P----------------G--QQLTL SIDHQTD--FGY--FLT-D---G------------------EDTIL-LHNSEM------TEDI-----EDRD EVEVFIYVDQQ--------ERL----AATMKIPIISADEY-----------GWVEVVDKVEDM--------- ----------GVF-VDVGLSKDALVATEHLPPY-----EDVWPQKGDKL-YCMLKVT-----NRGRMFAKPA PEDIISELFTDASEDLMNK-----ELT----GTVYR-LIASGSFVIT-D----DGIRCFIHPSE----RKEE P----RLGSRV-TGRVIQV-KEDGSVNLSLLPRKQD--AMSVD-AECILTYMRMRNGAMPYSDKS-----QP DDIRERFNMSKA--AFKRALGH---LMKNGKVY-----------------------------QENGW----- ------------------------------------------------------------------------ --------------------TY-------------------------------------------------- ----------------------------------------------------------EKK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_388984/1-298 hypothetical protein BSU11030 [Bacillus subtilis subsp. subtilis str. 168]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------MLTKSAENKRNRK-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------------DDS------ ------------------------------------------------------------------------ --------------------------------------------MR-P----------------G--QQLTL SIDHQTD--FGY--FLT-D---G------------------EDTIL-LHNSEM------TEDI-----EDRD EVEVFIYVDQQ--------ERL----AATMKIPIISADEY-----------GWVEVVDKVEDM--------- ----------GVF-VDVGLSKDALVATEHLPPY-----EDVWPQKGDKL-YCMLKVT-----NRGRMFAKPA PEDIISELFTDASEDLMNK-----ELT----GTVYR-LIASGSFVIT-D----DGIRCFIHPSE----RKEE P----RLGSRV-TGRVIQV-KEDGSVNLSLLPRKQD--AMSVD-AECILTYMRMRNGAMPYSDKS-----QP DDIRERFNMSKA--AFKRALGH---LMKNGKVY-----------------------------QENGW----- ------------------------------------------------------------------------ --------------------TY-------------------------------------------------- ----------------------------------------------------------EKK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_694208/1-282 hypothetical protein ABO_2488 [Alcanivorax borkumensis SK2]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------TVT------------ ------------------------------------------------------------------------ --------------------------------------------PK-L----------------G--TRHSL EILKV-I--RNG--LLL-DG--GEL-----------------GEVL-LPSREV-------ENQS--L-APGD SVMVTLY---S--------DGE----ARPM----ASLRTP-------RIQLGQVALLKVVSTSK----IGAF VDW-------GMP-KDL------LLPFA----------EQKGPVREESWVLVMLTTD------REG------ -RLMVSAQLDRFLSDTCQAYQQGDEVS----LVAAH-STDLGYKVVV-D----DHAWGMIAASEL------- -RAPLRPGQRV-TGYVQRL-REDQKLSLSLNAPGAA--KSDGL-TEQILAALENAGGELPLGDKSS-----P EVIFQTFRCSKN--AFKQA---------IGGLYKARRIVIEKERIFF------------------------- --PEGE------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01635902/1-280 hypothetical protein CdifQ_03001110 [Clostridium difficile QCD-32g58]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------MINIGDF----------------- ------------------------------------------------------------------------ -------------------------------------------------N-------KLT--------VK-- ------------------------------------------------------------------------ --------------------------------------------RKTE-------------F--G--YFLDG QTNNT----KDD--ILLHNR----L----------------------IGKNEI---------------NIGD EVNAFIFKDSD--------DRT----AATL------IPPL-------AKVGDVAHLKVVDNTDI-------- ----------GTF-IDMGLPKDILVPFK----------AKTYPLFRDEKYLFYIYLD-----KSKR------ ---IAATTDIDSYLLTDHTYNVGDIVT----GVVYGFQTNNSAMICV-D----NKYAGVILHNEY------- -FTELKAGDVLENLHVIKIYE-DGKLGLSPRGNRKD--ELDTL-ENKILSYLEGSDGYMRFNDKSD-----P KDISILFNSSKK--NFKRA---------LGVLMKKGLIYQDEEGTYL-K----------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00911695/1-278 RNA binding S1 [Clostridium beijerincki NCIMB 8052]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MIS------------ ------------------------------------------------------------------------ -----------------------------------------------V----------------G--QYSKL KVSKKVD--FGY--YLE-DN----F----------------GDEVL-LPNSAA------KGHEI----KEGD QLEVFIYRDSK--------DRM----ISTL------KKPL-------LTVGEIGYLEVVSQNNI-------- ----------GAF-VNFGLERDLFVPLKE---------QSYKLKEGKKYLFYMYV-------DKTD-RLAAT TRIHSYLDIAEE-----GKYKVSDEVN----AIVYE-INENATLNVAID----GEYRGLILANE-------- HFEYIYPGQEI-KGRVKRI-YEDGTIGVTTRKKRLE--ARSEL-SETILNYLKANGGFMPYNDKS-----SP DDIKREFNTSKN--YFK---------MTLGGLMREKLITQDKEGTRL------------------------- ----------------------------L------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_562566/1-280 hypothetical protein CPE1650 [Clostridium perfringens str. 13]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------IN-I----------------G--QFNKM KVVRE----ADFG-YYL-DR--GTRN---------------TSDDILIPTGNL------DGREI----KVGD EVEAFIY-------------------------------RD-------SRDRLIATLKKPLAVVG---DVALL EVK--SITKIGAF-VDFGLERDILVPLK----------EQKYKMEEGKKYLVYIYVD-----KTGR------ ---LAATTEVDKYLDEIEEPKMGTEVS----GIVYG-YQTNGSLRVAVD----NKHRAVVLKNEY------- -FTNIKPGDNI-KGKIIKV-YEDGIVGLSLRNHKLK--ERNEL-GDTILNYLKENGGVMSLNDKST-----P DEIRNTFKTSKN--YFKMA---------LGGLMKKGLIEQDEFGTRL------------------------- ------------------------------------------------------------------------ ------------------K----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_696335/1-280 hypothetical protein CPF_1902 [Clostridium perfringens ATCC 13124]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------IN-I----------------G--QFNKM KVVRE----ADFG-YYL-DR--GTRN---------------TSDDILIPTGNL------DGREI----KVGD EVEAFIY-------------------------------RD-------SRDRLIATLKKPLAVVG---DVALL EVK--SITKIGAF-VDFGLERDILVPLK----------EQKYKMEEGKKYLVYIYVD-----KTGR------ ---LAATTEVDKYLDEIEEPKMGTEVS----GIVYG-YQTNGSLRVAIN----NKHRAVVLKNEY------- -FTNIKPGDNI-KGKIIKV-YEDGIVGLSLRNHKLK--ERNEL-GDTILNYLKENGGVMSLNDKST-----P DEIRNTFKTSKN--YFKMA---------LGGLMKKGLIEQDEFGTRL------------------------- ------------------------------------------------------------------------ ------------------K----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_698937/1-280 hypothetical protein CPR_1621 [Clostridium perfringens SM101]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------IN-I----------------G--QFNKM KVVRE----ADFG-YYL-DR--GTRN---------------TSDDILIPTGNL------DGREI----KVGD EVEAFIY-------------------------------RD-------SRDRLIATLKKPLAVAG---DVALL EVK--SITKIGAF-VDFGLERDILVPLK----------EQKYKMEEGKKYLVYIYVD-----KTGR------ ---LAATTEVDKYLDEIEEPKMGTEVS----GIVYG-YQTNGSLRVAID----NKHRAVVLKNEY------- -FTNIKPGDNI-KGKIIKV-YEDGIVGLSLRNHKLK--ERNEL-GDTILNYLKENGGVMSLNDKS-----TP DEIRNTFKTSKN--YFK---------MALGGLMKKGLIEQDEFGTRL------------------------- ------------------------------------------------------------------------ ------------------K----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_781323/1-301 S1 RNA binding domain [Clostridium tetani E88]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MF----------------- ------------------------------------------------------------------------ -------------------------------------------------VYYDIINIKLN---EKYGGNN-- ------------------------------------------------------------------------ --------------------------------------------LEHL----------------G--KYEEF TIVRN-G--APG--YYL-DMKTG-N----------------TSDDVLLPHSDV------EGKEL----KIGD KVKVFIYKDSK--------NRP----IATI------KEPL-------AEVGDIAYLE----------VVDNT PMG-------SF--INIGVPKDILIPMAE---------KKYPLIVGKKYLFYIY-ID-----KSER------ ---IAATTDIESYLEMAEGYKIGDEVD----GIIYD-IYDNNSVAVAVE----GKYRAVMLKNEYYVK---- ----VNPGDKL-KFKVKRI-YEDGNLGLTIRITGKE--QRDKL-QEDILEYLKENNGFMPLNDYSS-----P EDIKNVFKESKN--YFKRS---------LGGLMKKGLIEQTKEGTKL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------IQK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_348262/1-282 Predicted nucleic acid binding protein, containing 2 S1 domains, YITL B.subtilis ortholog [Clostridium acetobutylicum ATCC 824]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------VK-I----------------G--EYNEL KVARK----SDFGLFLDAET--G-S----------------TSDDILLPMKDV---------EEDTI-EIGS TIKVFIYRDSK--------DRP------IA----TTREPY-------AKVGDTAYLK----------VVSNT KIG-------AF--LDFGLERDLFVPIKE---------QSYLLEPGKKYLFYV-YLD------KTG-RLAAT TYI----------DKILEVLEDEDLLKNELSGTVYG-FQSNGTIMVA-IE---NKYQGVILKNECFIK---- ----VSQGDVL-NNLRFKRKFEDGRIGLTTRKYPKD--ERVEL-EHKIYEYLKKNNGFMPYNDKSS-----P EDIKRVFHESKN--YFKNA---------LGGLMKKGLISQDKDGTKL------------------------- ------------------------------------------------------------------------ -----------------IK----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01355107/1-279 RNA binding S1 [Clostridium phytofermentans ISDg]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QL------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KIQTL TVAKT----TDFGVYLA-DNDNS-R----------------KEDTILLPKNQV-----AAGT------KIGD QLSVFVYKDSE--------DRP------------IATQTT-------PKLTLKEIAVLKVKEVT---TIGAF LDW-------GIA-KDL------FLPFK----------EQTHPVIADEEVLVSLYID-----KSKRLCATMK IYDMLQTDSPYGKDDKVT-------------GIVYEIIPAFGAFVAV-D----NKYSALIPNKEL------- -HTKLNPGETV-TARVTMVQAD-GKLDLSLREKTYL--QLDSD-AEIIYEKLTAAGGFLPFHDKSE-----P DAIKKEFNLSKN--AFKRA---------IGRLMKDNKIKILEDGIQI------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_878684/1-278 S1 RNA binding domain [Clostridium novyi NT]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IE-I----------------G--KIQTL KVSNI-A--KIG--AYL-DAGTG-E----------------QNDNILLPNNQL----------PESI-EEGD EVEVFVYRDSE--------DRL------------IATRKT-----------------PLVQAGE---LAILE VKD--TTRI-GAF-LDIGLERDVLLPFKEQKYKVL---PGKKYLVG-------LYID-----KSGR----LT ATTYVSKFLSSD-----SPYKKGEWVK----GTIYSINKEIGALVAV-D----NKYKGLIPRSEV------- -YKELKVGDSV-ECRIIRV-RDDGKLDLGTREVAYK--QMDSD-SEMILEKLKKYDGFMSLNDKS-----NP EEIKDRLKISKA--AFKRAV---GRLLKEGKIVQT-------------EKGIKLK----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_603939/1-281 S1 RNA binding domain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MIK--------VG-- ------------------------------------------------------------------------ --------------------------------------------KR------------------Q--KLVIN NFSSV----GAY--LFA-GT-DD------------------DKDNILLPNNEL------EGKDL----KEGD EVEVLIYRDSE--------DRL------IA----TFRKTE-------ALVGTLAKLEVVDDNPK----LGAF LDW-------GLN-------KDLMLPNSQ---------KETKVEIGKKYLVGLYEDS-----KGRV-SATMK IYKFLMPSN---------DIKKGDIVN----ATVYRINDEIGVFVAV-E----DRYFGLIPKSEC------- -FEKYSVGDEL-TLRVTRVRE-DKKLDLSPRKLLSQ--QIETD-AELVLGKMKLLKEHFRFNDESS-----A EDIKDYFGISKK--AFKRA---------IGSLLKNGLIEKNGDYFIL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------------KK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00144280/1-285 S1 RNA binding domain [Fusobacterium nucleatum subsp. vincentii ATCC 49256]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------EKM------------ ------------------------------------------------------------------------ --------------------------------------------IK-V----------------G--KRQKL VINNF-SSVGAY--LFA-GTDDD------------------KDNIL-LPNNEI------EGKDL----KEGD EVEVLIYRDSE---------------DRLI----ATFRKT-------EALVGTLAKLEVVDDNP---RLGAF LDW-------GLN-KDL------MLPNSQ---------KETKIEIGKKYLVGLYEDS-----KGRV-SATMK IYKFLMPSN---------DIKKGDIVN----ATVYRVNDEIGTFVAV-E----DRYFGLIPKSEC------- -FEKYSVGDEL-TLRVTRV-REDKKLDLSPRKLLSE--QMESD-AELVLGKMKLLKEHFRFNDESS-----A EDIKDYFGISKK--AFKRA---------IGSLLKKGLIEKSGEYFIL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------------KK----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01121323/1-276 hypothetical protein RB2501_15729 [Robiginitalea biformata HTCC2501]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------MIEL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--NYNTL TIKRS-T--RVG--LFL-GD--D-D----------------VDDLL-LPNKYV-----PDDF------EIGQ ELRVFCYLDHE--------ERP------IA----TTLEPL-------VTRNTFGYLE-VAEVNQ----FGAF LNW-------GLE-------KHLLVPFREQ-PE-----R---MEKGKSYVVYC-FLD-----PKSF-RLVAS ARI----NRFL--DNEEFSLSIGQPVS----ILPYR-TTDLGTEVIV-E----QRHKGLVFSDQI------- -YRNLEIGQPA-RGYIKAI-RKDNKLDVVLEPLGHE--KLEPT-AERIFRELEASGGMLPLHDK------SD PG------------EISKRLKMSKKLFKKG-------IGVLYKERRI------------------------- -------------DIRDDGIYLR------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_856651/1-364 nucleic acid binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------MDSSTVPLDFDS----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------EVY---PKVGLFA-- ------------------------------------------------------------------------ --------------------------------------------AK------------------G---RLTG DYIAV-KRPKGP------EN-HPRTGQGTRPCYRSWGNMRAHTDNEKLAIRTM----KEENTML----QIGK MNTLTVV-ELEERGAWLAADEY----GELL----LPKRQLPEGVAEGSEVKVFLYLDADCEPVITTDKPFAM VDD--IV---GLKVVNAN-KIGAFLDWGMKKDLFVPTREQNKPMQVGHVYLVRLMLD-----HEGR-MVGTS R---LERFLRTDKPP----FKAGDEVT----ALPGE-RTPLGIKAIV-N----GEYAGMLFKNEV-FGRV-- -----TTGRPL-TAWVKQV-RDDGKLDLTLQKPGMA--RMDDA-GELILARLKKQGGSLAVGDKSE-----P ELIYKLLGMSKG--TFKKA---------IGGLYKQGKIVLEDNCITL---------------------VAAD NAPDGE------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01311770/1-273 RNA binding S1 [Desulfuromonas acetoxidans DSM 684]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IQ-I----------------G--CWHTL VVMSRDD--RGA--TLL-------L----------------EEQPVLLPKKEC-------PIAT----QVGD EMTVFVY------------NG--------------------------RQDQLVATFKKPLAEAN---QFALM RVS--QANKFGAF-VDWGLDKELLVPFA----------EQPERLKAGRDYIVHVGID------NSG-RLIGS TRI----ERFLEVDEI--PFNPGEEVD----VLIWQ-LTELGAKVIV-N----NRYAGLIYKDEL------- PPD-LKRGELG-KAYVMRV-RDDNLIDITLRKVGKA--GMDEA-RQVVFQALQAEGRL-PLTDKSA-----P EEIEQMLGLSKK--AFKRA---------VGMLYKEQLIELDEREIRL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------R---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_572119/1-301 RNA binding S1 [Chromohalobacter salexigens DSM 3043]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MN-------------------- ------------------------------------------------------------------------ -------------------------------------------------A-------------ERQ------ ------------------------------------------------------------------------ -----------------------------------------------P-------------------SCCKV RLLLC-D--KSYPSHQS-PI----Y----------------TPTPPPWPLLAL---------------PGGV IMRTYLS-SVA--------AIM----SRSPDPAPRSSAPG-------RRASSSTRPPLARIGEV---AYLKV VAV--NTTG-AF--LDWGQPKDVLLPFAEQRFRPE---------VGKRVLVMLYE-------DAQG------ -RPVASMRLDRFLADEATDLKAGDQVA----LVVAE-RTDLGFKAVV-D----HRYWGLLYADDIV-----H PP---RRGQRL-TGYIKRV-REDGRLDLAMLPPGEA--GLDVV-GDKVLALLRCHGGFVALGDKTPAAE--- --IKARVGVSKS--AFKQA---------VGRLYKKRLITIEAEGIRL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----TREAI----DDASSD---------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01307318/1-277 nucleic acid binding protein [Oceanobacter sp. RED65]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IQ-I----------------G--RYNDL PVVRQ-L--PRG--LQL-DG--G------------------RAGEILLPKQYL------TGDE-----QVGD VMTVFIYRDSE--------DRL------IA----TTEQPK-------VQVGEFAYLNVVDETKH-------- ----------GCF-LDWGLPKDLFVPFS----------EQRQALKKGKQALVRVYLD-----DSNR----IA ASAKIDSFLLDIDDANV--YKKGDEVT----IVSAA-KSDLGLKVIV-N----GTHWGLIYESDL------- -FEPLKRGDKR-KAYIKRV-RDDHKLEISLRPLGFA--KVEGL-AGEVLDKLKAEGGFIALSDKSS-----P EAIKRVFKCSKN--AFKQA---------IGTLYKQQLIKIEKEGIRL------------------------- ----------------------------L------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01617836/1-294 nucleic acid binding protein [marine gamma proteobacterium HTCC2143]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------M-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------LML------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--QYNRL TVLDD-T--SQG--LYL-GY--R-DDSTDISEEDIDHRERRAEKVF-LPKAEV-------LESP----QVGD KIEVFLYIDSE--------DRI------AA----TTKTPL-------ACLGEFAWLK-IVDVSS----VGAF LDW-------GLP-------KDLFLPYAEQKF------T---PEVGRRVLVRV-YLD-----N-SN-RLAAS TRI----DTFL--DEDGSQFKSGQEVQ----LTIAD-STELGYKAIV-N----NSHWGILYSSEL------- -FQSIRKGQKI-TGYIRKV-RDDKKLDLSLTRIGFG--QVEEL-AEKILATLEKNDGFIMITDKSP-----P ETIYALFKVSKK--VYKKA---------IGVLYKQQKISIEKSGIRL------------------------- ------------------------------------------------------------------------ ------------------------------------------VHNE-------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01103706/1-278 conserved hypothetical protein [gamma proteobacterium KT 71]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MG-------------------- ------------------------------------------------------------------------ ---------------------------------------------------------REI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFHTM EILEI-G--RHS--AIL-DG--GDW-------------------GR-LSMDLR----LCPDTA-----EPGD GLEVFVYLDAS--------GQP----AVTT----EKPAAQ-------LGEVAWVEVVEVNDLGA-------F VDW-------GLP-------RDLFVPFA----------EQQHALKKGSHTLVRVYLD------NQG-RLAGS TRV------DHWIDDSSSALQQGQKVS----LMIAE-RTELGYKAII-N----HQCWGLLYSNEL-YQRVRK -------GQVL-TGFVQRI-RNDGRIDLSLNQPGFSRTKMDEV-SAKILARMEENDGFLSLTDKSP-----P REIYAVFGVSKK--VFKQA---------IGALYKQRIITLETDGIRF------------------------- ----------------------------L------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01625887/1-203 nucleic acid binding protein [marine gamma proteobacterium HTCC2080]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MEVNH----------------- ------------------------------------------------------------------------ -------------------------------------------------L-------GAF------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------ADW----------G-L----------------SKDLF-IPFAEQ----------HHPL-KPGN FTIVKVYLDNQ---------------GRPA------------------------------------------ ----------GST-----------------------------------------RID----------HWI-- -------------EDTATGLKVGEKVS----LLVAE-QTELGFKAII-N----HQFWGLLYSNEL-YRRIRR -------GQAL-DGYIQRI-RDDGKIDLSLNQPGFNNSKIDGV-AQKIVSQLNENSGFLGLTDKSP-----P PAIYAAFGVSKK--VFKQA---------IGSLYKARKITIEAEGIRL------------------------- -----------------------------------------------APDDA-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_383205/1-295 hypothetical protein Gmet_0235 [Geobacter metallireducens GS-15]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MEY------------ ------------------------------------------------------------------------ --------------------------------------------TEQP----------------GLCRLHTL KVVRV-D--KQG--VWL-EA--G------------------GRLAH-LPRREAPQS------------SPGD PVDVFLY---Q--------DGV----GELQA---TCRLPL-------AQAGEFALL-----------TVKSV GSH-------GAF-LDWGLAKDLLAP------------YRLQPERMQVARSYLVKVD----LDPQG------ -RPFANARIDDCLDRGRPDLREGDAVD----LLVWQ-FTDLGAKVIV-N----HRYPALLYRDELPAGAI-- ------VGMPL-SGYVKRL-REDGRLDVTLRKVGAE--AVSDA-RDAILAALAAHGGTLPLHDRSS-----P AAIEKALGMSKK--SFKKA---------VGGLYKDGLVTLNDEGIRLTGKGTANS----------------- ------------------------------------------------------------------------ ------------QSP--------------------------------------------------------- -----ERDRP--------------------------------LP---------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_358053/1-274 hypothetical protein Pcar_2647 [Pelobacter carbinolicus DSM 2380]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------ML----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--RVQSL TIDHI-D--QRG--AWL-QA--D------------------ETLVL-LPARQV-------PEES----RQGS QVEVFLYLHAG--------EPM-----ATI------RQPF-------AQVGEFALLRVNQADQS-------- ----------GTF-LEWGMEKELLVPFS----------EQPKRMREGQYHMVRVCLD------DQG-RCFAS GRI----DRWLEQDHIV--LREGQQVE----MVLWQ-FTDLGAKVIV-N----HRYGALLYRDEI------R PD--MQPGDRI-TGFVKTIRRD-GKIDVTLQRGGKA--ATDKA-VETLLDALSKTG-FLPLHDHS-----PA DVIRKQLGMSKK--TFKKA---------VGGLYKAGRIELMPNGIKL-----KKS----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01390394/1-279 RNA binding S1 [Geobacter sp. FRC-32]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------ML----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNEL EVKKL-S--PQG--AYL-QS--E------------------LGEIL-LPRRYV-----PAG-----L-QQGD RLRVFIYLDSE--------DRL-------I----ATTQRA-------RAQVGEFALLTVKEAGA----IGAF LDW-------GLD-------KDILVPFA----------EQNVPMRRGERHLVRLYLD-----KSE--RVSAS ARI----DRFLDNERIV--LEQGEEVD----LVIYQ-FTDLGAKVII-N----GIYSGLLFKNEL-YGR--- ----PGIGSRL-KGYVKKV-RDDKKIDVTLKKSGIQ--GLDTS-RDRILKTLATTGGFLPLTDKSS-----P DVIAEVLKMSKK--TFKKA---------VGSLYKDGFIDLKEEGIEI--RGSREK----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01592707/1-280 nucleic acid binding protein [Geobacter lovleyi SZ]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MRDSM----------------- ------------------------------------------------------------------------ ---------------------------------------------------------PLI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--QYSRL KIARI-T--PSG--AFL-----A------------------SEEGDILLPGKF----IPEGA------KIGT ELEVFVYLDSE---------------DRPV----ATVQKP-------FAVMGEFALLKVKDTNA---KVGSF LDW-------GLD-KDL------LLPFG----------EQLAPVKKGEQVLVCLYRD-------------SS GRIAASARLDRFLKPADAALAEGDGVD----LFIYA-YTDLGAKVVV-N----GRYAGMLFRNEL-YGRPK- ------AGERL-WGYVKKI-RDGGRIDITLRKGGAQ--EARSDRDLVLAALTNAPDGLLPLNDKS-----SP ESISGLLKLSKK--SFKKA---------VGGLYREGLITMSDDGIRL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------K---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01165127/1-278 hypothetical protein MED92_08391 [Oceanospirillum sp. MED92]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MP-EI----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--NYSTL EVIKE----KDFG-VYL-DA--GDL-----------------GEIL-LPRKYC------PEDL-----STGD RIRVFIYLDTD--------DYL------IA----TTEKPS-------TIVGEFAMLKVSAVNDV-------- ----------GAF-LDWGLAKEVLLPYSEQKNRPV--------EVGKRYLVR-LYLD-----KNTN------ -RIVASTKIDKFLDKSKPRYKVGEEVQ----LVIAN-RTDLGQKAIV-N----HEHWGMIFKSDL------- -LKTIYPGQKM-KGYIKEV-REDGKITLAMQKPGYS--KVVDT-AGQILEMLKEQDGYITVNDKSS-----P DIIYKLFGVSKK--AFKMA---------VGALLKQGKISIEPGGLRL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------KD-------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_927841/1-276 hypothetical protein Sama_1966 [Shewanella amazonensis SB2B]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QL------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCRL AVVKQ-V--NFG--FYL-NA--G-D----------------FGQVL-LPNKFA-----PDNL------QVGD ELDVFLYLDSE--------DTP------IA----TTQKPL-------AQVGEFANLK-IVSVSR----VGAF LDW-------GLD-------KDLLLPFAEQ-TRP--------PEEGKYQLVHL-HIN-----RADD-RIVAS AKL----DKFL--DKTPASYKPGQEVK----LVIAG-RTDLGYKAII-N----DSHWGLIHQSDV------- -FKPLRAGNKL-KGYIKQV-RHDGKIDLVLNKGTRD--------ELDAHSGVILK----KLQAAGGFLP-LG DKTDADVIYTEL--GMSKKAFKKS----IGGLFKQGKLRITDD----------------------------- ------------------GLYLN------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_750386/1-277 hypothetical protein Sfri_1697 [Shewanella frigidimarina NCIMB 400]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KRYSL EVVKQ-V--NFG--VYL-NA--Q-E----------------LGQVL-LPNKFV-----PTGC------NVGD MVDVFLYLDSE--------DIV------IA----TTQKSL-------AQVGEYAYLK-VIATGP----FGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------AEEGHSYLVYV-HAN-----HADE-RIMAS SKL----DKFV--DKTEAHYTEGEQVN----LIIGG-TTELGYKAII-N----NLHWGVIYANEV------- -FQKLRFGQKV-TGYIKTM-RSDGKIDLVLQKGDKD--ELDKN-ARLIINKLRSANGFLPLHDKT-----DA DVIYDKLGMSKK--AFKKS---------IGGLFKAGEITIESEGIRL------------------------- ------------------------------------------------------------------------ --------------------TV-------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00838846/1-277 conserved hypothetical protein [Shewanella sp. PV-4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KRCTL EIVKR-V--DFG--VYL-NA--H-E----------------FGQVL-LPNKVA-----PQGC------EVGD SVEVFLYLDSE--------DMV------IA----TTKRPK-------AQVGQFAYLK-AVATGP----YGAF LDW-------GLD-------KDLMLPFGEQ-HRE--------IEVGRSYLVYV-YVN-----SADD-RIVAS SKI----DKFL--DRTPPPYRNGQEVS----LIIAG-TTDLGYKAII-D----NGHWGVLYKNEV------- -YQPLKFGQRI-KGFIKRV-RSDDKIDLILQR------------GAKEELDKHATAILMKLNQAGGFLP-LT DKTDAEVIYAEL--AMSKKAFKKS----IGGLYKQQKIAIEADGIRL------------------------- ------------------------------------------------------------------------ -----------------TE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01436050/1-280 conserved hypothetical protein [Shewanella baltica OS195]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTRRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIMAS SKI----DKFL--DKTEPEYTVGEQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRL-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILIKLKQAGGFLALTDKT-----DA EIIYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------TETAE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00582912/1-280 conserved hypothetical protein [Shewanella baltica OS155]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTRRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIMAS SKI----DKFL--DKTDPEYTVGEQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRL-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILIKLKQAGGFLALTDKT-DAE-I- --IYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL------------------------- ------------------------------------------------------------------------ -----------------------------------------------TETAE-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_963758/1-280 hypothetical protein Sputw3181_2380 [Shewanella sp. W3-18-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTRRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIVAS SKI----DKFL--DKTEPDYTAGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRV-KGYIKQVRRD-GKIDLVLQQGNKQ--ELDKH-AHIILIKLKQAGGFLALTDKTD-AE-I- --IYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL-----TET----------------- ------------------------------------------------------------------------ -----------------AE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00815529/1-280 conserved hypothetical protein [Shewanella putrefaciens CN-32]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------LGQVL-LPNKVT-----PKDC------QVGD LLDVFLYLDSE--------DIV------IA----TTGRPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HAN-----RADE-RIVAS SKI----DKFL--DKTEPDYTAGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYENEV------- -FQKLRFGQRV-KGYIKQVRRD-GKIDLVLQQGNKQ--ELDKH-AHIILIKLKQAGGFLALTDKT-DAE-I- --IYDQLGMSKK--AFKKA---------IGGLFKNGQLSIDNDGLRL-----TEM----------------- ------------------------------------------------------------------------ -----------------AE----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_717476/1-279 hypothetical protein SO1868 [Shewanella oneidensis MR-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-AVATGP----FGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAHYEVGQQVD----LFIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRL-KGFIKQVRRD-SKIDLVLQQGSKQ--ELDKN-AHIILVKLKQAGGFLPLTDKTD-----A EVIYEQLGMSKK--AFKKS---------IGGLFKASKLSIDDDGLRL------------------------- -----------------------------------------------TEAD--------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_869262/1-279 hypothetical protein Shewana3_1623 [Shewanella sp. ANA-3]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MV----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-VVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAQYEVGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRV-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILVKLKQAGGFLPLTDKTD-----A EVIYEQLGMSKK--AFKKS---------IGGLFKAGKLSIDDDGLRL------------------------- -----------------------------------------------TETD--------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_733690/1-279 hypothetical protein Shewmr4_1555 [Shewanella sp. MR-4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAQYEVGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRV-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILVKLKQAGGFLPLTDKTD-----A EVIYEQLGMSKK--AFKKS---------IGGLFKAGKLSIDDDGLRL------------------------- -----------------------------------------------TEAD--------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_737682/1-279 hypothetical protein Shewmr7_1630 [Shewanella sp. MR-7]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------------------MI----------------- ------------------------------------------------------------------------ ---------------------------------------------------------QI------------- ------------------------------------------------------------------------ ----------------------------------------------------------------G--KTCKL EVVKQ-V--SFG--VYL-NA--H-E----------------FGQVL-LPNKAT-----PKDC------QVGD WLEVFLYLDSE--------DIV------IA----TTRKPL-------AQVGEFAYLK-AVATGP----YGAF LDW-------GLD-------KDLLLPFGEQ-HKP--------IEEGRSYLVYV-HVN-----RADE-RIVAS SKI----DKFL--DKTPAQYEVGQQVD----LYIGG-TTDLGYKAII-N----HAHWGVIYQNEV------- -FQKLRFGQRV-KGFIKQVRRD-GKIDLVLQQGSKQ--ELDKH-AHIILVKLKQAGGFLPLTDKTN-----A EVIYEQLGMSKK--AFKKS---------IGGLFKAGKLSIDDDGLRL-T----------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------EAD----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_811418/1-279 hypothetical protein BT2505 [Bacteroides thetaiotaomicron VPI-5482]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------MSIEL----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--KFNQL EVVKE----VDF--GLYLDG--G-D----------------EGEIL-LPTRYV------PEDC-----KVGD MLNVFLYLDID--------ERL------IA----TTLTPL-------VQVGQFACLEVSWVN-----QFGAF LNW-------GLM-KDL------FVPFSE---------QKMKMQVGRSYVVHA-HVD-----EESY------ -RIVASAKVERYLSKDMPDYAPGAEVD----ILIWQ-KTDLGFKAII-D----NKYSGLLYENEI------- -FRALETGMQM-KAFVKQV-REDGKVDLILQKPGFE--KVDDF-SKTLLEYIREHGGRINLNDKS-----PA EDIYDTFGVSKK--TFKKG---------VGDLYKKRLISLHETGITL------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------------------------AES----------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_097825/1-282 hypothetical protein BF0542 [Bacteroides fragilis YCH46]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------------------MKI--------MS-- ------------------------------------------------------------------------ --------------------------------------------IE-L----------------G--KFNQL EVVKQ----VDFG-MYL-DG--G-E----------------EGEIL-LPTRYV------PEDC-----KLGD WLNVFLYLDNE--------ERL------IA----TTLTPL-------VQVGEFACLEVSWVN-----QFGAF LNW-------GLM-KDL------FVPFSE---------QKMKMQVGNKYVIHA-HID-----DESF-RIVAS AK--VDRYLSKEKA----SYQPGEEVN----ILIWQ-KTDLGFKAII-E----NMYSGLLYDSEI------- -FQTLHTGDVL-KAYVKQV-REDGKIDLILQKPGFE--KIDDF-SKTLHRYITEHGGWIGLTDKS-----PA EEIYDTFGVSKK--TFKKA---------VGDLYKKRLILLHEDGIEL------------------------- ------------------------------------------------------------------------ ------------VRP--------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_968293/1-278 nucleic acid binding protein [Bdellovibrio bacteriovorus HD100]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------VQ-I----------------G--QINKL KVVKT-M--EYG--VFL-DG--G-S----------------DGEIL-LPARYQ-------PEKC----EVGD ELEVFVCFDSE--------DRL------VA----MTEMPF-------AMVGTFGLLKVKSIE-----RVGAF LDW-------GLP-------KDLFLPFSEQT-------RDLKIGQNVLVYLYLDNTD----------RISSS MRL----ERFIDKES--GNYEAGQSVD----LLIAA-KTDLGYKAII-N----GRHWGMLYANEV------- -FQQLEYGQRL-KGFIKQV-RDDGKIDLRLNEAGHK--ATADI-GERIMELLKSKGGFLPITDKTD-----P EAIYDLFGVSKK--KYKMA---------LGGLYKKRLITVHDDGIRL-AVGR-------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_942868/1-277 RNA binding S1 domain protein [Psychromonas ingrahamii 37]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M---------------------- ------------------------------------------------------------------------ --------------------------------------------IK-I----------------G--AYNEL TIIKQ----VDFG-VYL-D---G------------------QEDGEILLPRRY---------VTDDM-KIGQ TVVVFLYCDSE--------DRL------------IATTQK-------PKAEVGEFTSLKVVDTN---RAGAF LDW-------GLP-------KDLLVPFNQ---------QKTPMKEGYGYIVYIYQDD-------------IS ERLVASSKLDRFLDKEEANYKVGDKVD----LLIAE-RSDIGFKAII-N----NKHWGVLFPSDV------- -FGEMGIGKRC-KGYIKQV-REDGKIDLTLTQIGYG--KIDSL-AERVVQTLKLHQGYLQLSDKSS-----P EQIAKILKMSKA--NFKKA---------IGQLYRKKVIHIENNGIRL------------------------- --------------------------------------------NE-------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_609490/1-278 hypothetical protein PSEEN4007 [Pseudomonas entomophila L48]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VEF--GLYLDG--G-A----------------DGEIL-LPRRYF----PKDAEL-----ELDD WLNVFIYLDSE---------------DQLI----ATTEKP------------------KMQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EESRPLKIGDYCVVHAYLD------KRT------ RRITATAKLDRYLDRTPVDYKAGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEV------- -FKFLRSGMHE-KGFIKEV-RHDGKIALSLQPVGEA--LADTL-QEQIMQRLEAAGGVLPVCDKSD-----P AVISQMFNVSKG--NFKKA---------IGALFKQGRIVIHDDR-------IERA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01637998/1-278 RNA binding S1 [Pseudomonas putida W619]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VDF--GLYLDG--G-P----------------DGEIL-LPGRYI----PKNAET-----EVDD WLNVFLYLDSE---------------DQLI----ATTEKP------------------KVQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EEARPLKIGDYCVVHVYLD------KRT------ RRITATSRLDRYLDRTPADYQVGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEI------- -FKFMRSGMHE-KGFIKEV-RHDGKIALSLQPVGQA--LADGL-HEQIMQRLEAEGGVLPVCDKSD-----P EVISRMFNVSKG--NFKKA---------IGALFKQGRIVIHDDR-------IERA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_746672/1-278 hypothetical protein PP_4563 [Pseudomonas putida KT2440]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VDF--GLYLDG--G-A----------------DGEIL-LPGRYI----PKNAET-----EVDD WLNVFIYLDSE---------------DQLI----ATTEKP------------------KVQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EEARPLKIGDYCVVHVYLD------KRT------ RRITATSRLDRYLDVTPADYKVGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEV------- -FKFLRSGMHE-KGFIKEV-RQDGKISLSLQPVGAA--LADTL-QEQIMARLEAEGGVLGVCDKSD-----P ALISKLFNVSKG--NFKKA---------IGGLFKQGLIVIHDDR-------IEKA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00901665/1-278 RNA binding S1 [Pseudomonas putida F1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALL------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----VDF--GLYLDG--G-A----------------DGEIL-LPGRYI----PKNAET-----EVDD WLNVFIYLDSE---------------DQLI----ATTEKP------------------KVQVGE---FASLK VKD---INGAGIF-LDWGLSKDLLMPYS----------EEARPLKIGDYCVVHVYLD------KRT------ RRITATSRLDRYLDVTPADYKVGQPVE----LLVAG-ETPMGFKAII-N----NRHWGLIHKNEV------- -FKFLRSGMHE-KGFIKEV-RQDGKLSLSLQPVGAA--LADTL-QEQILARLEAEGGVLGVCDKS-----DP ALISKLFNVSKG--NFKKA---------IGGLFKQGLIVIHDDR-------IEKA----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_273723/1-278 nucleic acid binding protein [Pseudomonas syringae pv. phaseolicola 1448A]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH-T--NFG--LYL-D---GAQ----------------DGEIL-LPNRYI-----PKDIPT----EDED WLNVFIYLDSE--------DKL------IA----TTEKPK-------VQVSEFASLKVVEVN-----SIGVF LDW-------GLP-------KDLLLPYS--EEKRT--------LQAGEYCVVHVYLD-----KHTR-RITAT ARL------DRYLDKTPASYSVGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEV------- -FKFMRAGKQE-KGYIKEI-RADGNISLSLQPVGAE--AASSL-NSKILSKLRENNGTLPVSDKSD-----P QVISGLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIDL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_236855/1-278 RNA binding S1 [Pseudomonas syringae pv. syringae B728a]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH-T--NFG--LYL-D---GAQ----------------DGEIL-LPNRYI-----PKDVPT----EDED WLNVFIYLDSE--------DKL------LA----TTEKPK-------VQVGEFASLKVVEVN-----SIGVF LDW-------GLP-------KDLLLPYS--EEKRT--------LQAGDYCVVHVYLD-----KHTR-RITAT ARL------DRYLDKTPANYSVGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEV------- -FKFMRAGKQE-KGYIKEI-RSDGNISLSLQPVGAE--AASSL-NSKILTKLRENNGTLPVSDKSD-----P QVISGLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIEL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_791418/1-278 hypothetical protein PSPTO_1593 [Pseudomonas syringae pv. tomato str. DC3000]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QIVKH----TNFGLYLD-----G------------------AQDGEILLPNRY----IPKDVPT----EDED WLNVFIYLDSE--------DKL------IA----TTEKPK-------VQVGEFASLKVVEVNSI-------- ----------GVF-LDWGLPKDLLLPYS----------EEKRTLQAGEYCVVHVYLD-------KH-----T RRITATARLDRYLDKTPANYSVGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEV------- -FKFMRAGKQE-KGYIKEI-RSDGNISLSLQPVGAE--AASSL-NTKILSKLRENNGTLPVSDKS-----DP QVISGLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIDL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------V---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_347178/1-278 RNA binding S1 [Pseudomonas fluorescens PfO-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALV------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QVVKH----TNF--GLYLDG--G-A----------------DGEIL-LPNRYI-----PKDIPS----EDED WLNVFIYLDSD---------------DKLI----ATTEKP------KVQVGEFASLKVVEVNSI-------- ----------GVF-LDWGLPKDLLLPYS----------EEKRQMTAGEYCVVHVYLD-------KH-----T RRITATARLDRYLDKTPANYSAGQEVD----LLVAE-ATDMGFKAII-N----NKHWGLIHKNEI------- -FKFMRAGMRE-KGFIKEV-RADGKISLSLQPVGQE--AASSL-NSKILAKLRESNGTLAVSDKSD-----P ALISSLFGVSKG--NFKKA---------IGSLYKNGQIVIHADRIEL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------T---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >YP_258690/1-283 hypothetical protein PFL_1564 [Pseudomonas fluorescens Pf-5]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------RVL---EMA--LV-- ------------------------------------------------------------------------ ----------------------------------------------------------------G--RYNSL QVVKH----TNF--GLYLDG--G-A----------------DGEIL-LPNRYI-----SKDIPS----EDED WLNVFVYLDSA--------DKL------IA----TTEKPK-------VQVGEFASLKVVEVNSI-------- ----------GVF-LDWGLPKDLLLPYS----------EEKRQMNAGEYCVVHVYLD-------KH-----T RRITATARLDRYLDKTPANYKAGQEVD----LLVAE-STDMGFKAII-N----NKHWGLIHKNEV------- -FKFLRSGMQE-KGFIKEV-RADGKISLSLQPVGEQ--AATSL-NSKILAKLRENDGSLAVSDKS-----DP ALISSLFGVSKG--NFKKA---------IGALYKQGQIVIHADRIEL------------------------- ------------------------------------------------------------------------ -------------------------------------------------------S---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00415804/1-279 RNA binding S1 [Azotobacter vinelandii AvOP]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------ALI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH----TDF--GLYLDD--G-E----------------DGEIL-LPRRYV-----PRDRPS----EVGD RLDVFVYLDSD--------DRL------IA----TTLRPK-------IQVGGFASLKVVQIDRV-------- ----------GLF-LDWGLPKDLLLPHS----------EEKRPLQVGDHCVVHAYLD------------ART RRIVATARLDRYLDRTPPDYRPGQAVE----LLVVE-QTPLGFKAIV-E----GRHWGLIHRNEL------- -FKPVRPGMRE-RGYIRDV-RADGRIGLTLQPAGQA--ARDEL-AERILARLDEEGGTLPFGDKTP-----P ERIAQLFGVSKG--TFKKA---------IGGLYKQGLIVIHDDR---------------------------- ----------------------------------------------------------------------IE RSR--------------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01525610/1-280 RNA binding S1 [Pseudomonas mendocina ymp]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RMNSL QVVKH----TDF--GLYLDG--G-A----------------DGEIL-LPKRYI-----PKDTPS----EVDD WLNVFIYLDSE--------DKL------IA----TTLKPK-------IQLGEFASLKVVDINRV-------- ----------GLF-FDWGLPKDLLLPHS----------EEKRPLQIGDYCVIYLYLD------KRT------ RRLTATARLDRHLDKVPANYQVGQEVD----LLVVE-RTDLGFKAII-D----GKHWGLIHKNEL------- -FKFIRSGMRE-KGYIKEL-RADGKISLSLQPIGRE--AASGL-AEQIIERLRAQGGVLALGDKSP-----P EAIAEQFRVSKG--NFKKA---------IGGLYKQGLIHIHDDRIEL------------------------- ----------------------------LDN----------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_01295814/1-279 hypothetical protein PaerP_01002311 [Pseudomonas aeruginosa PA7]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH----TEFGLYLD-----GTQ----------------HGEIL-LPRRYV-----PKDQPS----EVGD WLNVFIYLDSD--------DRL------IA----TTQTPK-------VQVGGFASLKVVEINRI-------- ----------GLF-LDWGLPKDLLLPHS----------EEKRPLQVGDYCVVYVYLD-----KRTN------ -RITATARLDRQLDNVPPRYSVGQAVD----LLVVE-RTEMGFKAII-E----GKHWGLIHKNEA------- -FRFLRSGMRE-QGYIREL-RADGKIALSLQPVGAE--AAVEL-SQQILARLLEAGGSLPLSDKSS-----P EDIHRLFGVSKG--TFKKA---------IGGLYKKGLILIHPERIEL------QR----------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >AAT51018/1-280 PA1116 [synthetic construct]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH-T--EFG--LYL-D---GTQ----------------HGEIL-LPKRYV-----PKDQPS----EVGD WLNVFIYLDSD--------DRL------------IATTQT-------PKVQVGGFASPKVVEIN---RIGLF LDW-------GLP-------KDLLLPHS----------EEKRPLQVGDYCVVYVYLD-----KRTN-RITAT ARL------DRQLDNLPPRYSVGQAVD----LLVVE-RTEMGFKAII-E----GKHWGLIHKNE-------- AFKFLRSGMRE-QGYIKEL-RADGKIALSLQPVGAE--AAVEL-SQQILARLLEAGGSLPLSDKS-----SP EDIHRLFGVSKG--TFKKA---------IGGLYKKGLILIHPEHIEL------------------------- --PRG------------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_249807/1-279 hypothetical protein PA1116 [Pseudomonas aeruginosa PAO1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ -------------------------------------------------M-------AVI------------ ------------------------------------------------------------------------ ----------------------------------------------------------------G--RFNSL QVVKH----TEFGLYLD-----GTQ----------------HGEIL-LPKRYV-----PKDQPS----EVGD WLNVFIYLDSD--------DRL------IA----TTQTPK-------VQVGGFASLKVVEINRI-------- ----------GLF-LDWGLPKDLLLPHS----------EEKRPLQVGDYCVVYVYLD-----KRTN------ -RITATARLDRQLDNLPPRYSVGQAVD----LLVVE-RTEMGFKAII-E----GKHWGLIHKNE-------- AFKFLRSGMRE-QGYIKEL-RADGKIALSLQPVGAE--AAVEL-SQQILARLLEAGGSLPLSDKS-----SP EDIHRLFGVSKG--TFKKA---------IGGLYKKGLILIHPERIEL------------------------- ------------------------------------------------------------------------ --------------P----------------------------------------R---------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_348585/1-276 Ribosomal protein S1 [Clostridium acetobutylicum ATCC 824]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MRNELNSNEY----------------- ------------------------------------------------------------------------ ---------------------------------------------------------NLMASRQSR------ ------------------------------------------------------------------------ -------------------------------------------------------------------KILTG TLAAM----ENV------KI--G------------------QDENVDCGVVFY------------------D EFKILI--PIR--------EMN------------VSREDK-------------------------------- --------------------------------------RVIRSMIGAEIDFIVMEFD-----DENR-TAIAS RKEAMELRKNLE----LKKHKVGEKIF----VRVTS-VGRNNCRVDC------YGIEYRVPINEIDYGYIDK VDKYVQVGDVV-PAIIKELDIDNNIVVVSIKEAKED--PYLGI-VKSLNKGGEYLGVVTGIKDYGIFLT-IR KGVNCLCPFP----NWANF----SPA--VGEKFVVRIKSINYDEKKI-NANLMRP----------------- -----------INQRNKYNPTWG------------------------------------------------- -----------------LG----------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_623612/1-257 Ribosomal protein S1 [Thermoanaerobacter tengcongensis MB4]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------MTE----------------------------------------AWQDIYASRQSNK---ILTGT LSAIESQEDKNFA-VIFYDGVKVIIPFEEMGIENINK-TIVRSMIGAEIDFVVRGID-----TEKE-IAIAS RKFAMNLRKKYE----LPKHEEGDVIL----ARIVA-IGKNHAIAEV------YGIETKVPKEEIGYGYIDR INDLLQVGDRV-PAKITKLDIENSVVEISIKQTKPN--PFEQV-DTKYKKGGEYLGTVTGSQPYGYFVN-LE PGID--VLCPNP--YWKTK-------IEKGDKVTVRITRIDHKKQRI-TGVLKRL----------------- ------VRKAQ------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00884659/1-258 RNA binding S1 [Caldicellulosiruptor saccharolyticus DSM 8903]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MKQTQKD-EV----------------- ------------------------------------------------------------------------ -------------------------------------------------R-------RLL---QKS--YN-- ---------------------------Y-------------------------------------------- ----------------------------------------------------------------K--TILTG QLAGK-K-------------------------------------------------------------KIGD ------------------------------------------------------------------------ -----KTYG-----VVLYQGIRCLLPAEEVDLSTETVNDKIGALLGATIEFVVTDIQ-------KD-NVFIS RKV----AKQLRRIEFENNVKEGQIIN----GRVIG-VSPKNVYVDA------FGYEFGLTAKDVDYKWIHD MRERFKVGDSV-KAKVIS----KNPPQISIKEALTT--PWEKD-PDRYKVGEQYVGKVVAVANLGIFVDLIE DGRQVLCPPMGL------------KTPVIGSVVVVLIKDINKEQKKM------------------------- -------------------------------------------WGD-------------------------- -------IVRIISEP--------------------------------------------------------- --------RI-------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00886356/1-258 RNA binding S1 [Caldicellulosiruptor saccharolyticus DSM 8903]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------------------MKQTKKD-EV----------------- ------------------------------------------------------------------------ -------------------------------------------------R-------RLL---QKS--YN-- ---------------------------Y-------------------------------------------- ----------------------------------------------------------------K--TILTG TVTGK-K-------------------------------------------------------------KVGD ------------------------------------------------------------------------ -----KTYG-----VVLYQGTRCLMPPEEVDLSTESINDPIGALLGATIEFVVTDIQ-------KD-NVFIS RKI----AKQLRRIEFENNVKEGQIIN----GRVIG-VSPKNVYVDA------FGYEFGLTAKDVDYKWIHD MRERFKVGDSV-KAKVIS----KNPPQISIKEAAMT--PWDKD-PDRYKVGEQYVGKVVAVANLGIFIDLIE DGRQVLCPPMGL------------KTPVIGSTVVVLIKDIDKQQKKM------------------------- -------------------------------------------WGD-------------------------- -------IVRVISEP--------------------------------------------------------- --------RI-------------------------------------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >NP_229244/1-543 ribosomal protein S1 [Thermotoga maritima MSB8]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-PF----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EFN---DEI--LS-- ---------------------------QYEPEE--------------------------------------- --------------------------------------------FR-R----------------G--QIVKG VVIGK-E--DDG--VVV-DF--G-G----------------KSEGF-VPENEL----IKSLDEY----KVGE NLTLQIL-NLN--------YEE-----RSI----LSERRP-------VLRKTLEELRKDYEEKK---PVKAR IVS--QTKG-GYN-VLLKGVVSAFLPGSHSLL------RRNDPMPEKEIEVIILEMA----QTRRGPRIVVS RRALQDKKI----EEFFSEKKVGDIVE----GTVKG-ISNAGVEVEI-S----EGVRGFIPRSELSYDTRIS PEDIVKPGQNI-TAKIIELDKVKKNVILSLKKLMPD--PWEKV-EEKYPVGKVVSGEVTSIHPFGFFVR-LE PGVEGLVPRSEV--FWGNARKSLEEVVSVGDLVEVEVINVDKENRKL-TLSYRKA-------KGDPWENIED RYNVNNVVTGKVTGIIKQGAFVE-----LEEGVEGFVPVSEISWKR--IDEPGEILKIGEKVKVKILKIDKE NRKITLSIKRTQENP--WE-RA---LKELKPDSIVSGTIKK-IVNSGVVVEV--------EEYDVEGFVPNN HL---------------LSEPETGKALNLVVLRIDPDEVFGGRMILSEKR--------YEERKNIEEYK--- --------------KMVEKESSQKSIGDLLKK----------------NGE--------------------- ------------------------------------------------------------------------ ------------ >ZP_01652472/1-543 RNA binding S1 [Thermotoga petrophila RKU-1]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------------------------ME-PF----------------- ------------------------------------------------------------------------ ---------------------------------------------------------EFN---DEI--LS-- ---------------------------QYEPEE--------------------------------------- --------------------------------------------FR-R----------------G--QIVTG VVIGK-E--DGG--VVV-DF--G-G----------------KSEGF-VPENEL----IKSLDEY----KVGE NLTLQIL-NLN--------YEE-----RSI----LSERRP-------VLRKTLEELRKDYEEKK---PVKAR IVS--QTKG-GYN-VLLKGVVSAFLPGSHSLL------RRNDPIPEKEIEVIILEMV----QTKRGSRIVVS RRALQDRKI----EEFFSEKKVGDIIE----GTVKG-ISNAGVEVEI-S----EGIRGFIPKSELSYDNRIS PEDVVKPGQNI-TAKIIELDERKKNVILSLKRLMPD--PWEKV-KEKYPVGKVVGGEVISIHSFGFFVR-LE PGVEGLVPRSEV--FWGNARKNLEEVVSVGDLVKVEVINVDKENRKL-TLSYRKA-------KGDPWENIED RYNVNNVVTGKVTGIIKQGAFVE-----LEEGVEGFVPVSEISWKR--IDEPGEILKIGEKVKVKILKIDKE NRKITLSIRRTQENP--WE-RA---LKELKPDSIVRGTIER-IVNSGVIVKV--------EKYDVEGFVPNN HL------------VSEPETGKILNLVVLRIDPDEVFGGRMILSEKRYEE--------RKNIEEYKKMV--- -----------------EKESSQKTIGDLLKK----------------NGE--------------------- ------------------------------------------------------------------------ ------------ >AAQ75180/1-556 30S ribosomal protein S1 [Alvinella pompejana epibiont 7G3]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------------MSTKLEDIEVEDVDF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------AML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------KR-D----------------TNNDLVEG TIVKI-NEAENQ--VVV-DI--G-R----------------KNEAI-MSLDQI--R-DEDGNIM--F-NIGD TIPVVIT-KRN---------------GERVS---ISYELA-------EKRIALSEFIDEYDDEE-EYIVEGV IVR--KNRG-GFV-VDVS-GLEFFMPKTLSYISPK------INPIGKRVKALIVKVD-----KDKQ-SVIVS RKDLIEREKKEIQEIVDKLLTDKAVVL----GTVKK-ITSYGMFVDV------GGLDGLVHYSKISHKGPVN PAKHFKEGDEV-NVVAIDFDKKKKHLSLSIKDATPD--PWEDI-DKSLRRGDSVSVEVSNIEPYGAFVD-LG NDLEAFLHVSEI--SWDKNVKHPKDYLNIGDKLDVEVIEIDKSKRKL-RVSRKTL-------LPKPIEIFAS KYRVGDIVKGKISSITDFGAFVK------IDDIEGLIHNQEVSWDK--SATAKNSLKKGDEVEAKIIKIDIE NGKISLSKKALEESP--IS-KF---AKNHRVGDVVEGSVKD-KKDFGIFVSL---------DKGVDALLRLE DLG-----------AIKFDELQKGDSVRGIITYLDPKNGKIRISARRLQK--------QEEREALKKVN--- -----------------KEQDDILTLGDVLKEYLNK------------------------------------ ------------------------------------------------------------------------ ------------ >YP_393386/1-551 RNA binding S1 [Thiomicrospira denitrificans ATCC 33889]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ -----------------------------------------MAFDNESFEEEENF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------EMFAASEKQ--QE-- ------------------------------------------------------------------------ -----------------------------------------------T----------------S--RIVEG EVVEI-Q--ADENRALV-GV--G-D----------------KLEGI-LSLDEI----SENGVLK--F-NVGD KIKVMVTGYYN--------ERP------KI----SYKKVL-------EQQKTIDFIDKHKENFE-DIIIDGV ITK--KNRG-GYV-VEAD-DVTFFMPRSLAAF------KDTDEVLGRKIKAQVVKID-----AEQN-SIVVS RRKLFNDERKKKKEIIDKLMEDDTTIE----GTIKK-ITSYGMFVDV------GGVDGLVHYNEISYKGPVN PSKLYKEGDAV-TVKAISYDKDKRHLSLSIKAVQSD--PWAEV-ESELDEGDTITVTVSNIEAYGVFVD-LG NDIEGFLHISEI--SWDKNVKNPNDYLTVGQEIDVEVIEINPKTHKL-RVSLKRL-------LAKPFDEFMK KHNEGDVITGTVTSLTDFGAFVR------IDGIEGLLHNQDISWDK--NVRCKDVLKTGDEVEVKIAKINPE DQKISLNRKALLESP--ID-SF---SKSHKVNSVVSGTIRD-IKDFGVFVSL---E----DG--VDALIRDE DLS-----------PLQKSDLEVGQQIEAAIAVIDTRRDRIRLSVKKLDY--------IKNQAMLDEIN--- ----------------DDESH---SLGDLIKDKFK------------------------------------- ------------------------------------------------------------------------ ------------ >YP_892406/1-557 30S ribosomal protein S1 [Campylobacter fetus subsp. fetus 82-40]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MAEVNKIVRNDMSDKIDVEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AMF---EES--LK-- ------------------------------------------------------------------------ --------------------------------------------AE-E----------------S--TICDG VIVNI-K--DDE--VFV-DV--R-K----------------KSEGV-MNISEI----TDDGGSL--LYNIGD TIKVAITGSRN---------------GRPI----VSHKKA-------LRKEKVKTFIDNFDENA-ENIYDIK IIS--KNKG-GFVAISED-GIEFFMPKSQSGF------RDSNQVMNKTFKAKVLKVD-----KNDQ-SIIVS RKKLLDEDRRKRKEAIANIIDNTDIIE----GTIKK-ITTYGMFVDV------GGIDGLVHYSEISYKGPVN PNTLYKEGDKV-DVKIIKYDNDKKHLSLSIKAATPD--PWDEI-KDGLEVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDFIKENEELDVEVIEIDVNERRL-RVSLKNL-------LPKPFDEFSS KFKEGDIVKGVVTTLTNFGAFVR------VGALEGLLHNEDSSWDR--NDKCKDILKTGDEIDVKIIKIDDK NQKISLSQKDLKDSP--VT-QY---AKVHSVGDIVTGTVRD-IKDFGIFVSL--------EGN-VDALIRKE DIG-----------SLDPLTLKAGDKIEAAIAFIDEKKNRIRLSVKRLAR--------QKEREVLNEIN--- ----------------DDDKM---TLGDIIKEQLA------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01374976/1-558 hypothetical protein Ccon1_01000402 [Campylobacter concisus 13826]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MAVNKSVQLGKAKDEDIEDIDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------KT------------------E--EDSDA KIVSI-N--GDE--VLI-DV--G-K----------------KSEGI-LNVSEI---TDANGNLT--H-KVGD TIKVVIT---G--------SRN----GRPI----VSHKKA-------LRKEKVKAFIEAYDPEN-SGEIDVK VVG--KNKG-GFITQDAN-GVEFFLPRTHSGF------KNAEGVVGKSYKVRVIKVD-----KEEN-SIVVS RKKILDDDRKKRKEALSSIVENDSVIE----GTVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSSLYKEGDKV-LVKVISYDNEKRHLSLSIKAATPD--PWEEIINDGLEVGDTIKVTVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDHISEGQEIDVEVIEIDAKGHRL-RVSLKNL-------LPKPFDEFKA KFKEGDVVKGVVTTITNFGAFVR------VGCVEGLLHNEDASWDR--NDKCKDMFKAGDELEVKIIKIDSA EQKISLSLKDLKQSP--VQ-AF---ANKFSVGDIVKGTIRD-IKDFGVFVEL---------GDNVDALIRKE DLG-----------SVDASTLKIGDEIEAAIAFIDEKKNRIRLSIRRLAK--------QKEREVLNEIN--- ------------------DNDDKVTLGDIIKEQLR------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01376609/1-557 hypothetical protein Ccur5_01000714 [Campylobacter curvus 525.92]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MAVNKSVQLSKAKDEDIEDIDF----------------- ------------------------------------------------------------------------ -------------------------------------------------A-------AML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------KT------------------E--EDSDG VIVDI-K--GDE--VLV-NV--G-K----------------KSEGI-LNISEI--T-DANGDLM--Y-KVGD TIKVAIT---G--------SRG----GRPI----VSHKKA-------LRKEKVKAFIEAYDPEN-SGEIDVK IIN--KNKG-GFVAQDAN-GVEFFLPKTQSGF------KNANDVVGKSYKVRVIKVD-----KDEN-SIVVS RKKILDDDRKKRKEALANIVDNADVIE----GTIKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSSLYNEGDKV-LVKVISYDNEKRHLSLSIKAAMPD--PWEEILSDGLEVGDTIKVTVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDHISEGQEIDVEVIEIDAKGHRL-RVSLKNL-------LPKPFDEFKA KFKEGDVVKGVVTTVTNFGAFIR------IDCVEGLLHNEDASWDR--NDKCKDMFKPGDEVEVKIIKIDNA EQKISLSLKDLKQSP--VQ-EF---ANKFNVGDIVKGTIRD-IKDFGVFVEL---------GDNVDALIRKE DLG-----------SVDVQSLKIGDEIEAAIAFIDEKKNRIRLSIRRLAK--------QKEREVLNEIN--- ----------------DNDKV---TLGDIIKEQLQ------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_00368554/1-517 ribosomal protein S1 , putative [Campylobacter lari RM2100]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ---------------------------------MSEVNKKVQNRLEDIIIEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------E-------QML---EES--FK-- ------------------------------------------------------------------------ --------------------------------------------SD-E----------------E--ATTQG IIVAI-K--GDE--VFV-NV--G-Q----------------KSEGI-LAIEEI--Q-NDKGEFI--F-KEGD TLEVAIV---G--------SRG----GRSL----LSHKKA-------LRKQKVKEFIDNYKDDES--MFDVK IIG--KNRG-GFVAVDEN-GVEFFLPKSQSSF------KDSNNIINKTFKVKIIKID-----KEAQ-SIVVS RKKIVDEERKKRKEIISNVLNQEEIIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSSLYNEGDKV-PVKVIKYDKDKKHLSLSIKLAMPD--PWDEI-KDGLEVGDTIKVTVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNAKNPKDYISEGQELDVEVIEINAKERRL-RVSLKNL-------LAKPFDEFLK SHKVGDVVKGSVTSVTNFGAFVK------IANLEGLLHNEDASWNR--NDKCKDMYKVGDVIEVKIIKLDKE NQKISLSTKELQKSP--VQ-VY---AQKHQVNDIISGKIRD-IKDFGVFVEL---E----EG--VDALIHKE DLG-----------NVDFSSLKVGDIIEALIVFIDEKKN--------------------------------- ------------------------------------------------------------------------ ------------------------------------------------------------------------ ------------ >ZP_00370169/1-557 ribosomal protein S1, putative [Campylobacter upsaliensis RM3195]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MNEANKKVQNNIEDLFGEEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------KLL---DAY--DK-- ------------------------------------------------------------------------ --------------------------------------------SKEE----------------A---IFEG KIVAI-K--NDE--VYV-DI--G-K----------------KSEGL-LALEEI--Q-DDKGNLI--F-NVGD SIKVATM---G--------SRG----GRIV----VSHKKA-------LRKEKVVEFIKNYNEENEN-IFDVK VIS--KNKG-GLVAVDND-GVEFFIPKSQYSFK------NSNNPIGKNFKVKIIKVD-----KEEQ-SIVAS RKRVLEDERKKRKEIISEILDKNELIE----GLVKK-ITTYGIFVDV------GGIDGLVHYSEISYKGPVN PSSLYKEGDKV-PVKIIKYDKDKKHLSLSIKAALPD--PWSEI-KDSLEVGDTIKVVVSNIEPYGAFVD-LG NDIEGFLHISEI--SWNKNIKNPKDYISKGEEIDVEVIEINSDERRL-RVSLRNL-------LSKPFDEFSK THKVGDMTQGIVTSITAFGAFVK------IDNVEGLLHNEDASWDR--NDKCKELFKIGDEIKVKIIKIDED HQKISLSTKELKNSP--VQ-EY---AKTHKIGDVVKGIIRD-IKDFGIFVEL---------SENVDALIHKE DIS-----------SAMLETLKIDDEIEAAIAFIDEKKNRIRLSVKNLLR--------LKEREVLNEIN--- -------------------GDDKMTLGDIIKEQLS------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_00367065/1-556 ribosomal protein S1 VC1915 , putative [Campylobacter coli RM2228]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQNNLEDYLEDEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SR-E----------------E--TITEG VIVEI-K--NDE--VYV-DI--G-R----------------KSEGI-LALNEI------QDENANLLFKVGD SIKVAVV---G--------SRG----GRSL----LSHKKA-------LRKEKVIDFIQNYKEDD-EYIFEVK VVG--KNKG-GLV-VVNDDDVEFFLPKSQYGF------KENNNLIGKTFKVKIIKVD-----KEEQ-SIIVS RKKTLDDERKKRKELINNIAQQEGLIE----GVVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PSILYKEGDKV-PVKVVKYDKDRKHLSLSIKAALPD--PWGEI-KDSLEVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYISKGQEIDVEVIEINSDERRL-RVSLRNL-------LSKPFDEFMK NHKIGDVIEGEVTSTTSFGAFVK------IGSVEGLLHNEDASWDR--NEKCKDKFNNGDIIKVKIIKIDEE GQKISLSIKELSESP--VQ-EY---AKNHKVGDIVKGKIRD-IKDFGVFVEL---------NKNVDALIHKE DIS-----------ASTLENLKIGDEIEAAIAFIDEKKNRIRLSVKNLVR--------IKEREVLNEIN--- ----------------SDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01377833/1-556 hypothetical protein Cjejd_01001494 [Campylobacter jejuni subsp. doylei 269.97]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQGSVDDYLEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SR-E----------------E--ATTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI------QDDNSKLLFNVGN SIKVAVV---G--------SRS----GRSL----LSHKKA-------LRKEKVVEFIKNYQENQ-DDIFNVK VVG--KNKG-GLIVVDDN-DVEFFLPKSQYGF------KEINNITGKTFKVKIIKIN-----KDEQ-SIIVS RKKTLDDERKKRKELISNIVQQENLIE----GIVKK-ITTYGMFVDV------GSVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSVKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPSERRL-RVSLRNL-------LSRPFDEFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDYIEAAIVFIDEKKNRIRLSVKNLVR--------MKEREVFNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >ZP_01070310/1-556 ribosomal protein S1 [Campylobacter jejuni subsp. jejuni 260.94]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ --------------------------------MSEVNKKVQGGVDDYL-EEE-DF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SREE----------------A---TTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI--Q-DDNSKLL--F-NVGD SIKVAVM---G--------SRG----GRSL----LSHKKA-------LRKEKVIEFIKNYQENQDD-IFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGFK------ETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNVAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDGFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------MKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >YP_001000568/1-556 ribosomal protein S1 [Campylobacter jejuni subsp. jejuni 81-176]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQGGVDDYLEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SREE-------------------ATTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI------QGDNSKLLFNVGD SIKVAVMGSRG---------------GRSL----LSHKKA-------LRKEKVIEFIKNYQENQ-DDIFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGF------KETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNIAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDGFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSTKELSSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------MKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- ------------------------------------------------------------------------ ------------ >YP_178970/1-556 30S ribosomal protein S1 [Campylobacter jejuni RM1221]. ------------------------------------------------------------------------ ------------------------------------------------------------------------ ----------------------------------MSEVNKKVQDGVDDYLEEEDF----------------- ------------------------------------------------------------------------ -------------------------------------------------G-------QLL---EAF--DK-- ------------------------------------------------------------------------ --------------------------------------------SR-E----------------E--ATTEG VIVEI-K--NDE--VYV-DI--G-K----------------KSEGI-LALSEI------QGDNSKLLFNVGD SIKVAVM---G--------SRG----GRSL----LSHKKA-------LRKEKVIEFIKNYQENQ-DDIFTVK VVG--KNKG-GLIVVDEN-DVEFFLPKSQYGF------KETNNIIGKTFKVKIIKID-----KDEQ-SIIVS RKKTLDDERRKRKELINNVAQQEDLIE----GIVKK-ITTYGMFVDV------GGVDGLVHYSEISYKGPVN PGTLYKEGDKV-PVKVIKYDKERKHLSLSIKAALPD--PWSEI-KDTLDVGDTIKVIVSNIEPYGAFVD-LG NDIEGFLHISEI--SWDKNIKNPKDYINKGQEIDVEVIEINPNERRL-RVSLRNL-------LSRPFDEFMK SYKIADVVEGEITSVTSFGAFVK------LGGIEGLLHNEDASWDR--NDKCKDKFSQGDKIKVKIIKIDEE NQKISLSAKELNSSP--VQ-EY---AKIHKVGDIVKGTIRD-IKDFGVFVEL---------SKNVDALIHKE DIS-----------TSMLENLKIGDDIEAAIVFIDEKKNRIRLSVKNLVR--------IKEREVLNEIN--- ----------------NDDKV---TLGDIIKDQLA------------------------------------- -------------------------------------------------------