| ID | Species Name | Group | Subgroup | Accessions |
| Acin.baum._CP000521 | Acinetobacter baumannii ATCC 17978 | Gammaproteobacteria | Pseudomonadales | CP000521 |
| Acin.spec._CR543861 | Acinetobacter species ADP1 | Gammaproteobacteria | Pseudomonadales | CR543861 |
| Acti.succ._CP000746 | Actinobacillus succinogenes 130Z | Gammaproteobacteria | Pseudomonadales | CP000746 |
| Agro.tume._AE007869 | Agrobacterium tumefaciens str. C58 | Alphaproteobacteria | Rhizobiales | AE007869 |
| Agro.tume._AE007951 | Agrobacterium tumefaciens str. C58 | Alphaproteobacteria | Rhizobiales | AE007951 |
| Agro.tume._AE008984 | Agrobacterium tumefaciens str. C58 | Alphaproteobacteria | Rhizobiales | AE008984 |
| Alca.bork._AM286690 | Alcanivorax borkumensis SK2 | Gammaproteobacteria | Oceanospirillales | AM286690 |
| Anab.vari._CP000117 | Anabaena variabilis ATCC 29413 | Cyanobacteria | Nostocales | CP000117 |
| Anae.spec._CP000769 | Anaeromyxobacter species Fw109-5 | Deltaproteobacteria | Myxococcales | CP000769 |
| Anap.marg._CP000030 | Anaplasma marginale str. St. Maries | Alphaproteobacteria | Rickettsiales | CP000030 |
| Aqui.aeol._AE000657 | Aquifex aeolicus VF5 | Aquificae | Aquificales | AE000657 |
| Aqui.aeol._AE000759 | Aquifex aeolicus VF5 | Aquificae | Aquificales | AE000759 |
| Arth.aure._CP000474 | Arthrobacter aurescens TC1 | Actinobacteria | Actinobacteridae | CP000474 |
| Arth.spec._CP000454 | Arthrobacter species FB24 | Actinobacteria | Actinobacteridae | CP000454 |
| Azoa.spec._AM406670 | Azoarcus species BH72 | Betaproteobacteria | Rhodocyclales | AM406670 |
| Azoa.spec._CR555306 | Azoarcus species EbN1 | Betaproteobacteria | Rhodocyclales | CR555306 |
| Bart.hens._BX897699 | Bartonella henselae strain Houston-1 | Alphaproteobacteria | Rhizobiales | BX897699 |
| Bart.quin._BX897700 | Bartonella quintana str. Toulouse | Alphaproteobacteria | Rhizobiales | BX897700 |
| Bdel.bact._BX842656 | Bdellovibrio bacteriovorus HD100 | Deltaproteobacteria | Bdellovibrionales | BX842656 |
| Bifi.adol._AP009256 | Bifidobacterium adolescentis ATCC 15703 | Actinobacteria | Actinobacteridae | AP009256 |
| Bifi.long._AE014295 | Bifidobacterium longum NCC2705 | Actinobacteria | Actinobacteridae | AE014295 |
| Bifi.long._AX492782 | Bifidobacterium longum | Actinobacteria | Actinobacteridae | AX492782 |
| Bloc.flor._BX248583 | Blochmannia floridanus | Gammaproteobacteria | Enterobacteriales | BX248583 |
| Bloc.flor._BX248585 | Blochmannia floridanus | Gammaproteobacteria | Enterobacteriales | BX248585 |
| Bloc.flor._BX248585 | Blochmannia floridanus | Gammaproteobacteria | Enterobacteriales | BX248585 |
| Bord.aviu._AM167904 | Bordetella avium 197N | Alphaproteobacteria | Rhizobiales | AM167904 |
| Bord.para._BX640426 | Bordetella parapertussis strain 12822 | Betaproteobacteria | Burkholderiales | BX640426 |
| Bord.pert._BX640415 | Bordetella pertussis strain Tohama I | Betaproteobacteria | Burkholderiales | BX640415 |
| Borr.afze._CP000395 | Borrelia afzelii PKo | Spirochaetes | Spirochaetes | CP000395 |
| Borr.burg._AE000783 | Borrelia burgdorferi B31 | Spirochaetes | Spirochaetes | AE000783 |
| Borr.burg._AE001151 | Borrelia burgdorferi B31 | Spirochaetes | Spirochaetes | AE001151 |
| Borr.gari._CP000013 | Borrelia garinii Pbi | Spirochaetes | Spirochaetes | CP000013 |
| Brad.japo._BA000040 | Bradyrhizobium japonicum USDA 110 | Alphaproteobacteria | Rhizobiales | BA000040 |
| Brad.spec._CP000494 | Bradyrhizobium species BTAi1 | Alphaproteobacteria | Rhizobiales | CP000494 |
| Brad.spec._CU234118 | Bradyrhizobium species ORS278 | Alphaproteobacteria | Rhizobiales | CU234118 |
| Bruc.abor._AE017223 | Brucella abortus biovar 1 str. 9-941 | Alphaproteobacteria | Rhizobiales | AE017223 |
| Bruc.meli._AE009624 | Brucella melitensis 16M | Alphaproteobacteria | Rhizobiales | AE009624 |
| Bruc.meli._AM040264 | Brucella melitensis biovar Abortus 2308 | Alphaproteobacteria | Rhizobiales | AM040264 |
| Bruc.ovis._CP000708 | Brucella ovis ATCC 25840 | Alphaproteobacteria | Rhizobiales | CP000708 |
| Bruc.suis._AE014291 | Brucella suis 1330 | Alphaproteobacteria | Rhizobiales | AE014291 |
| Buch.aphi._AE013218 | Buchnera aphidicola str. Sg (Schizaphis graminum) | Gammaproteobacteria | Enterobacteriales | AE013218 |
| Buch.aphi._AE014017 | Buchnera aphidicola str. Bp (Baizongia pistaciae) | Gammaproteobacteria | Enterobacteriales | AE014017 |
| Buch.aphi._AE014122 | Buchnera aphidicola str. Sg (Schizaphis graminum) | Gammaproteobacteria | Enterobacteriales | AE014122 |
| Buch.aphi._AE016826 | Buchnera aphidicola str. Bp (Baizongia pistaciae) | Gammaproteobacteria | Enterobacteriales | AE016826 |
| Buch.aphi._BA000003 | Buchnera aphidicola str. APS (Acyrthosiphon pisum) | Gammaproteobacteria | Enterobacteriales | BA000003 |
| Burk.ceno._CP000380 | Burkholderia cenocepacia AU 1054 | Betaproteobacteria | Burkholderiales | CP000380 |
| Burk.ceno._CP000458 | Burkholderia cenocepacia HI2424 | Betaproteobacteria | Burkholderiales | CP000458 |
| Burk.cepa._CP000440 | Burkholderia cepacia AMMD | Betaproteobacteria | Burkholderiales | CP000440 |
| Burk.mall._CP000010 | Burkholderia mallei ATCC 23344 | Betaproteobacteria | Burkholderiales | CP000010 |
| Burk.mall._CP000526 | Burkholderia mallei SAVP1 | Betaproteobacteria | Burkholderiales | CP000526 |
| Burk.mall._CP000546 | Burkholderia mallei NCTC 10229 | Betaproteobacteria | Burkholderiales | CP000546 |
| Burk.mall._CP000548 | Burkholderia mallei NCTC 10247 | Betaproteobacteria | Burkholderiales | CP000548 |
| Burk.pseu._CP000124 | Burkholderia pseudomallei 1710b | Betaproteobacteria | Burkholderiales | CP000124 |
| Burk.pseu._CP000570 | Burkholderia pseudomallei 668 | Betaproteobacteria | Burkholderiales | CP000570 |
| Burk.pseu._CP000572 | Burkholderia pseudomallei 1106a | Betaproteobacteria | Burkholderiales | CP000572 |
| Burk.spec._CP000151 | Burkholderia species 383 | Betaproteobacteria | Burkholderiales | CP000151 |
| Camp.curv._CP000767 | Campylobacter curvus 525.92 | Epsilonproteobacteria | Campylobacterales | CP000767 |
| Camp.jeju._AL111168 | Campylobacter jejuni subsp. jejuni NCTC 11168 | Epsilonproteobacteria | Campylobacterales | AL111168 |
| Camp.jeju._AL139074 | Campylobacter jejuni subsp. jejuni NCTC 11168 | Epsilonproteobacteria | Campylobacterales | AL139074 |
| Camp.jeju._CP000025 | Campylobacter jejuni RM1221 | Epsilonproteobacteria | Campylobacterales | CP000025 |
| Camp.jeju._CP000538 | Campylobacter jejuni subsp. jejuni 81-176 | Epsilonproteobacteria | Campylobacterales | CP000538 |
| Camp.jeju._CP000768 | Campylobacter jejuni subsp. doylei 269.97 | Epsilonproteobacteria | Campylobacterales | CP000768 |
| Cand.Bloc._CP000016 | Candidatus Blochmannia pennsylvanicus str. BPEN | Gammaproteobacteria | Enterobacteriales | CP000016 |
| Caul.cres._AE005673 | Caulobacter crescentus CB15 | Alphaproteobacteria | Caulobacterales | AE005673 |
| Caul.cres._AE005700 | Caulobacter crescentus CB15 | Alphaproteobacteria | Caulobacterales | AE005700 |
| Caul.cres._U22036 | Caulobacter crescentus | Alphaproteobacteria | Caulobacterales | U22036 |
| Caul.cres._U49738 | Caulobacter crescentus | Alphaproteobacteria | Caulobacterales | U49738 |
| Chla.abor._CR848038 | Chlamydophila abortus strain S26/3 | Chlamydiae/Verrucomicrobia | Chlamydiae | CR848038 |
| Chla.cavi._AE015925 | Chlamydophila caviae GPIC | Chlamydiae/Verrucomicrobia | Chlamydiae | AE015925 |
| Chla.cavi._AE016995 | Chlamydophila caviae GPIC | Chlamydiae/Verrucomicrobia | Chlamydiae | AE016995 |
| Chla.muri._AE002160 | Chlamydia muridarum Nigg | Chlamydiae/Verrucomicrobia | Chlamydiae | AE002160 |
| Chla.muri._AE002321 | Chlamydia muridarum Nigg | Chlamydiae/Verrucomicrobia | Chlamydiae | AE002321 |
| Chla.pneu._AE001363 | Chlamydophila pneumoniae CWL029 | Chlamydiae/Verrucomicrobia | Chlamydiae | AE001363 |
| Chla.pneu._AE001624 | Chlamydia pneumoniae | Chlamydiae/Verrucomicrobia | Chlamydiae | AE001624 |
| Chla.pneu._AE002161 | Chlamydophila pneumoniae AR39 | Chlamydiae/Verrucomicrobia | Chlamydiae | AE002161 |
| Chla.pneu._AE002198 | Chlamydophila pneumoniae AR39 | Chlamydiae/Verrucomicrobia | Chlamydiae | AE002198 |
| Chla.pneu._BA000008 | Chlamydophila pneumoniae J138 | Chlamydiae/Verrucomicrobia | Chlamydiae | BA000008 |
| Chla.trac._AE001298 | Chlamydia trachomatis D/UW-3/CX | Chlamydiae/Verrucomicrobia | Chlamydiae | AE001298 |
| Chla.trac._CP000051 | Chlamydia trachomatis A/HAR-13 | Chlamydiae/Verrucomicrobia | Chlamydiae | CP000051 |
| Chlo.tepi._AE006470 | Chlorobium tepidum | Bacteroidetes/Chlorobi | Chlorobi | AE006470 |
| Chlo.vulg._AB001684 | Chlorella vulgaris C-27 chloroplast | Organelles | chloroplast | AB001684 |
| Chro.sale._CP000285 | Chromohalobacter salexigens DSM 3043 | Gammaproteobacteria | Oceanospirillales | CP000285 |
| Chro.viol._AE016825 | Chromobacterium violaceum ATCC 12472 | Betaproteobacteria | Neisseriales | AE016825 |
| Chro.viol._AE016918 | Chromobacterium violaceum ATCC 12472 | Betaproteobacteria | Neisseriales | AE016918 |
| Colw.psyc._CP000083 | Colwellia psychrerythraea 34H | Gammaproteobacteria | Alteromonadales | CP000083 |
| Cory.diph._BX248354 | Corynebacterium diphtheriae gravis NCTC13129 | Actinobacteria | Actinobacteridae | BX248354 |
| Cory.effi._BA000035 | Corynebacterium efficiens YS-314 | Actinobacteria | Actinobacteridae | BA000035 |
| Cory.glut._AP009044 | Corynebacterium glutamicum R | Actinobacteria | Actinobacteridae | AP009044 |
| Cory.glut._BA000036 | Corynebacterium glutamicum ATCC 13032 | Actinobacteria | Actinobacteridae | BA000036 |
| Cory.glut._BX927148 | Corynebacterium glutamicum ATCC 13032 | Actinobacteria | Actinobacteridae | BX927148 |
| Cory.jeik._CR931997 | Corynebacterium jeikeium K411 | Actinobacteria | Actinobacteridae | CR931997 |
| Coxi.burn._AE016828 | Coxiella burnetii RSA 493 | Gammaproteobacteria | Legionellales | AE016828 |
| Coxi.burn._CP000733 | Coxiella burnetii Dugway 7E9-12 | Gammaproteobacteria | Legionellales | CP000733 |
| Cyan.cald._AF022186 | Cyanidium caldarium strain RK1 chloroplast | Organelles | chloroplast | AF022186 |
| Cyan.mero._AB002583 | Cyanidioschyzon merolae chloroplast | Organelles | chloroplast | AB002583 |
| Cyan.mero._AY286123 | Cyanidioschyzon merolae DBV201 chloroplast | Organelles | chloroplast | AY286123 |
| Dech.arom._CP000089 | Dechloromonas aromatica RCB | Betaproteobacteria | Rhodocyclales | CP000089 |
| Dein.geot._CP000359 | Deinococcus geothermalis DSM 11300 | Deinococcus-Thermus | Deinococci | CP000359 |
| Dein.radi._AE000513 | Deinococcus radiodurans R1 | Deinococcus-Thermus | Deinococci | AE000513 |
| Dein.radi._AE002056 | Deinococcus radiodurans R1 | Deinococcus-Thermus | Deinococci | AE002056 |
| Desu.psyc._CR522870 | Desulfotalea psychrophila LSv54 | Deltaproteobacteria | Desulfobacterales | CR522870 |
| Desu.vulg._AE017285 | Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough | Deltaproteobacteria | Desulfovibrionales | AE017285 |
| Desu.vulg._AE017311 | Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough | Deltaproteobacteria | Desulfovibrionales | AE017311 |
| Desu.vulg._CP000527 | Desulfovibrio vulgaris subsp. vulgaris DP4 | Deltaproteobacteria | Desulfovibrionales | CP000527 |
| Dich.nodo._CP000513 | Dichelobacter nodosus VCS1703A | Gammaproteobacteria | Cardiobacteriales | CP000513 |
| Ehrl.cani._CP000107 | Ehrlichia canis str. Jake | Alphaproteobacteria | Rickettsiales | CP000107 |
| Ente.faec._AE016830 | Enterococcus faecalis V583 | Firmicutes-Bacilli | Lactobacillales | AE016830 |
| Ente.faec._AE016953 | Enterococcus faecalis V583 | Firmicutes-Bacilli | Lactobacillales | AE016953 |
| Ente.faec._BD193435 | Enterococcus faecialis | Firmicutes-Bacilli | Lactobacillales | BD193435 |
| Erwi.caro._BX950851 | Erwinia carotovora subsp. atroseptica SCRI1043 | Gammaproteobacteria | Enterobacteriales | BX950851 |
| Esch.coli._AE005174 | Escherichia coli O157:H7 EDL933 | Gammaproteobacteria | Enterobacteriales | AE005174 |
| Esch.coli._AE014075 | Escherichia coli CFT073 | Gammaproteobacteria | Enterobacteriales | AE014075 |
| Esch.coli._AE016756 | Escherichia coli CFT073 | Gammaproteobacteria | Enterobacteriales | AE016756 |
| Esch.coli._AP009048 | Escherichia coli W3110 | Gammaproteobacteria | Enterobacteriales | AP009048 |
| Esch.coli._BA000007 | Escherichia coli O157:H7 str. Sakai | Gammaproteobacteria | Enterobacteriales | BA000007 |
| Esch.coli._CP000243 | Escherichia coli UTI89 | Gammaproteobacteria | Enterobacteriales | CP000243 |
| Esch.coli._CP000247 | Escherichia coli 536 | Gammaproteobacteria | Enterobacteriales | CP000247 |
| Esch.coli._CP000468 | Escherichia coli APEC O1 | Gammaproteobacteria | Enterobacteriales | CP000468 |
| Esch.coli._U00096 | Escherichia coli K12 MG1655 | Gammaproteobacteria | Enterobacteriales | U00096 |
| Esch.coli._U82664 | Escherichia coli | Gammaproteobacteria | Enterobacteriales | U82664 |
| Esch.coli._X01074 | Escherichia coli | Gammaproteobacteria | Enterobacteriales | X01074 |
| Fran.alni._CT573213 | Frankia alni str. ACN14A | Actinobacteria | Actinobacteridae | CT573213 |
| Fran.spec._CP000249 | Frankia species CcI3 | Actinobacteria | Actinobacteridae | CP000249 |
| Fran.tula._AJ749949 | Francisella tularensis subsp. tularensis SCHU S4 | Gammaproteobacteria | Thiotrichales | AJ749949 |
| Fran.tula._AM233362 | Francisella tularensis subsp. holarctica LVS | Gammaproteobacteria | Thiotrichales | AM233362 |
| Fran.tula._AM286280 | Francisella tularensis subsp. tularensis strain FSC 198 | Gammaproteobacteria | Thiotrichales | AM286280 |
| Fran.tula._CP000437 | Francisella tularensis subsp. holarctica OSU18 | Gammaproteobacteria | Thiotrichales | CP000437 |
| Fran.tula._CP000439 | Francisella tularensis subsp. novicida U112 | Gammaproteobacteria | Thiotrichales | CP000439 |
| Fran.tula._CP000608 | Francisella tularensis subsp. tularensis WY96-3418 | Gammaproteobacteria | Thiotrichales | CP000608 |
| Fran.tula._CP000803 | Francisella tularensis subsp. holarctica FTA | Gammaproteobacteria | Thiotrichales | CP000803 |
| Geob.meta._CP000148 | Geobacter metallireducens GS-15 | Deltaproteobacteria | Desulfuromonadales | CP000148 |
| Geob.sulf._AE017180 | Geobacter sulfurreducens PCA | Deltaproteobacteria | Desulfuromonadales | AE017180 |
| Geob.uran._CP000698 | Geobacter uraniumreducens Rf4 | Deltaproteobacteria | Desulfuromonadales | CP000698 |
| Gloe.viol._BA000045 | Gloeobacter violaceus PCC 7421 DNA | Cyanobacteria | Gloeobacteria | BA000045 |
| Gluc.oxyd._CP000009 | Gluconobacter oxydans 621H | Alphaproteobacteria | Rhodospirillales | CP000009 |
| Grac.tenu._AY673996 | Gracilaria tenuistipitata var. liui chloroplast | Organelles | chloroplast | AY673996 |
| Guil.thet._AF041468 | Guillardia theta plastid | Organelles | plastid | AF041468 |
| Haem.ducr._AE017143 | Haemophilus ducreyi strain 35000HP | Gammaproteobacteria | Legionellales | AE017143 |
| Haem.ducr._AE017154 | Haemophilus ducreyi strain 35000HP | Gammaproteobacteria | Legionellales | AE017154 |
| Haem.ducr._U32175 | Haemophilus ducreyil | Gammaproteobacteria | Legionellales | U32175 |
| Haem.infl._BD426631 | Haemophilus influenzae Rd | Gammaproteobacteria | Legionellales | BD426631 |
| Haem.infl._CP000057 | Haemophilus influenzae strain 86-028NP | Gammaproteobacteria | Legionellales | CP000057 |
| Haem.infl._CP000671 | Haemophilus influenzae PittEE | Gammaproteobacteria | Legionellales | CP000671 |
| Haem.infl._CP000672 | Haemophilus influenzae PittGG | Gammaproteobacteria | Legionellales | CP000672 |
| Haem.infl._L42023 | Haemophilus influenzae Rd KW20 | Gammaproteobacteria | Legionellales | L42023 |
| Haem.infl._U32795 | Haemophilus influenzae Rd KW20 | Gammaproteobacteria | Legionellales | U32795 |
| Haem.somn._CP000436 | Haemophilus somnus 129PT | Gammaproteobacteria | Legionellales | CP000436 |
| Hahe.chej._CP000155 | Hahella chejuensis KCTC 2396 | Gammaproteobacteria | Oceanospirillales | CP000155 |
| Halo.halo._CP000544 | Halorhodospira halophila SL1 | Gammaproteobacteria | Chromatiales | CP000544 |
| Heli.acin._AM260522 | Helicobacter acinonychis str. Sheeba | Epsilonproteobacteria | Campylobacterales | AM260522 |
| Heli.hepa._AE017125 | Helicobacter hepaticus ATCC 51449 | Epsilonproteobacteria | Campylobacterales | AE017125 |
| Heli.hepa._AE017149 | Helicobacter hepaticus ATCC 51449 | Epsilonproteobacteria | Campylobacterales | AE017149 |
| Heli.pylo._AE000511 | Helicobacter pylori 26695 | Epsilonproteobacteria | Campylobacterales | AE000511 |
| Heli.pylo._AE000524 | Helicobacter pylori 26695 | Epsilonproteobacteria | Campylobacterales | AE000524 |
| Heli.pylo._AE001439 | Helicobacter pylori J99 | Epsilonproteobacteria | Campylobacterales | AE001439 |
| Heli.pylo._AE001441 | Helicobacter pylori J99 | Epsilonproteobacteria | Campylobacterales | AE001441 |
| Heli.pylo._BD010626 | Helicobacter pylori | Epsilonproteobacteria | Campylobacterales | BD010626 |
| Heli.pylo._CP000241 | Helicobacter pylori HPAG1 | Epsilonproteobacteria | Campylobacterales | CP000241 |
| Idio.loih._AE017340 | Idiomarina loihiensis L2TR | Gammaproteobacteria | Alteromonadales | AE017340 |
| Kine.radi._CP000750 | Kineococcus radiotolerans SRS30216 | Actinobacteria | Actinobacteridae | CP000750 |
| Kleb.pneu._CP000647 | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | Gammaproteobacteria | Enterobacteriales | CP000647 |
| Lact.acid._CP000033 | Lactobacillus acidophilus NCFM | Firmicutes-Bacilli | Lactobacillales | CP000033 |
| Lact.brev._CP000416 | Lactobacillus brevis ATCC 367 | Firmicutes-Bacilli | Lactobacillales | CP000416 |
| Lact.case._CP000423 | Lactobacillus casei ATCC 334 | Firmicutes-Bacilli | Lactobacillales | CP000423 |
| Lact.delb._AF496545 | Lactobacillus delbrueckii subsp. lactis | Firmicutes-Bacilli | Lactobacillales | AF496545 |
| Lact.delb._CP000412 | Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | Firmicutes-Bacilli | Lactobacillales | CP000412 |
| Lact.delb._CR954253 | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 | Firmicutes-Bacilli | Lactobacillales | CR954253 |
| Lact.gass._CP000413 | Lactobacillus gasseri ATCC 33323 | Firmicutes-Bacilli | Lactobacillales | CP000413 |
| Lact.john._AE017198 | Lactobacillus johnsonii NCC 533 | Firmicutes-Bacilli | Lactobacillales | AE017198 |
| Lact.john._AE017201 | Lactobacillus johnsonii NCC 533 | Firmicutes-Bacilli | Lactobacillales | AE017201 |
| Lact.john._AX926712 | Lactobacillus johnsonii NCC533 | Firmicutes-Bacilli | Lactobacillales | AX926712 |
| Lact.lact._AE006305 | Lactococcus lactis subsp. lactis IL1403 | Firmicutes-Bacilli | Lactobacillales | AE006305 |
| Lact.lact._AM406671 | Lactococcus lactis subsp. cremoris MG1363 | Firmicutes-Bacilli | Lactobacillales | AM406671 |
| Lact.lact._CP000425 | Lactococcus lactis subsp. cremoris SK11 | Firmicutes-Bacilli | Lactobacillales | CP000425 |
| Lact.plan._AL935253 | Lactobacillus plantarum strain WCFS1 | Firmicutes-Bacilli | Lactobacillales | AL935253 |
| Lact.sali._CP000233 | Lactobacillus salivarius subsp. salivarius UCC118 | Firmicutes-Bacilli | Lactobacillales | CP000233 |
| Legi.pneu._AE017354 | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 | Gammaproteobacteria | Legionellales | AE017354 |
| Legi.pneu._CP000675 | Legionella pneumophila str. Corby | Gammaproteobacteria | Legionellales | CP000675 |
| Legi.pneu._CR628336 | Legionella pneumophila str. Paris | Gammaproteobacteria | Legionellales | CR628336 |
| Legi.pneu._CR628337 | Legionella pneumophila str. Lens | Gammaproteobacteria | Legionellales | CR628337 |
| Legi.pneu._M31830 | Legionella pneumophila | Gammaproteobacteria | Legionellales | M31830 |
| Leif.xyli._AE016822 | Leifsonia xyli subsp. xyli str. CTCB07 | Actinobacteria | Actinobacteridae | AE016822 |
| Magn.magn._AP007255 | Magnetospirillum magneticum AMB-1 | Alphaproteobacteria | Rhodospirillales | AP007255 |
| Mann.succ._AE016827 | Mannheimia succiniciproducens MBEL55E | Gammaproteobacteria | Pasteurellales | AE016827 |
| Mari.aqua._CP000514 | Marinobacter aquaeolei VT8 | Gammaproteobacteria | Alteromonadales | CP000514 |
| Mari.mari._CP000449 | Maricaulis maris MCS10 | Alphaproteobacteria | Rhodobacterales | CP000449 |
| Meso.flor._AE017263 | Mesoplasma florum L1 | Firmicutes-Mollicutes | Mycoplasmatales | AE017263 |
| Meso.loti._BA000012 | Mesorhizobium loti MAFF303099 | Alphaproteobacteria | Rhizobiales | BA000012 |
| Meso.viri._AF166114 | Mesostigma viride chloroplast | Organelles | chloroplast | AF166114 |
| Meth.caps._AE017282 | Methylococcus capsulatus str. Bath | Gammaproteobacteria | Methylococcales | AE017282 |
| Meth.flag._CP000284 | Methylobacillus flagellatus KT | Betaproteobacteria | Methylophilales | CP000284 |
| Micr.lyso._M31831 | Micrococcus lysodeikticus | Actinobacteria | Actinobacteridae | M31831 |
| Myco.aviu._AE016958 | Mycobacterium avium subsp. paratuberculosis str. K10 | Actinobacteria | Actinobacteridae | AE016958 |
| Myco.aviu._AE017228 | Mycobacterium avium subsp. paratuberculosis str. k10 | Actinobacteria | Actinobacteridae | AE017228 |
| Myco.aviu._CP000479 | Mycobacterium avium 104 | Actinobacteria | Actinobacteridae | CP000479 |
| Myco.bovi._BX248347 | Mycobacterium bovis subsp. bovis AF2122/97 | Actinobacteria | Actinobacteridae | BX248347 |
| Myco.capr._CP000123 | Mycoplasma capricolum subsp. capricolum ATCC 27343 | Firmicutes-Mollicutes | Mycoplasmatales | CP000123 |
| Myco.capr._D00560 | Mycoplasma capricolum | Firmicutes-Mollicutes | Mycoplasmatales | D00560 |
| Myco.capr._S67588 | Mycoplasma capricolum | Firmicutes-Mollicutes | Mycoplasmatales | S67588 |
| Myco.gall._AE015450 | Mycoplasma gallisepticum strain R | Firmicutes-Mollicutes | Mycoplasmatales | AE015450 |
| Myco.gall._AE016968 | Mycoplasma gallisepticum strain R | Firmicutes-Mollicutes | Mycoplasmatales | AE016968 |
| Myco.geni._BD439871 | Mycoplasma genitalium | Firmicutes-Mollicutes | Mycoplasmatales | BD439871 |
| Myco.geni._L43967 | Mycoplasma genitalium G37 | Firmicutes-Mollicutes | Mycoplasmatales | L43967 |
| Myco.geni._U39706 | Mycoplasma genitalium G37 | Firmicutes-Mollicutes | Mycoplasmatales | U39706 |
| Myco.hyop._AE017243 | Mycoplasma hyopneumoniae J | Firmicutes-Mollicutes | Mycoplasmatales | AE017243 |
| Myco.hyop._AE017244 | Mycoplasma hyopneumoniae 7448 | Firmicutes-Mollicutes | Mycoplasmatales | AE017244 |
| Myco.hyop._AE017332 | Mycoplasma hyopneumoniae 232 | Firmicutes-Mollicutes | Mycoplasmatales | AE017332 |
| Myco.lepr._AL023596 | Mycobacterium leprae cosmid B2407 | Actinobacteria | Actinobacteridae | AL023596 |
| Myco.lepr._AL583925 | Mycobacterium leprae strain TN | Actinobacteria | Actinobacteridae | AL583925 |
| Myco.mobi._AE017308 | Mycoplasma mobile 163K | Firmicutes-Mollicutes | Mycoplasmatales | AE017308 |
| Myco.myco._BX293980 | Mycoplasma mycoides subsp. mycoides SC str. PG1 | Firmicutes-Mollicutes | Mycoplasmatales | BX293980 |
| Myco.myco._BX842642 | Mycoplasma mycoides subsp. mycoides SC | Firmicutes-Mollicutes | Mycoplasmatales | BX842642 |
| Myco.myco._X53678 | Mycoplasma mycoides | Firmicutes-Mollicutes | Mycoplasmatales | X53678 |
| Myco.pene._BA000026 | Mycoplasma penetrans HF-2 | Firmicutes-Mollicutes | Mycoplasmatales | BA000026 |
| Myco.pneu._AE000044 | Mycoplasma pneumoniae M129 | Firmicutes-Mollicutes | Mycoplasmatales | AE000044 |
| Myco.pneu._S76009 | Mycoplasma pneumoniae | Firmicutes-Mollicutes | Mycoplasmatales | S76009 |
| Myco.pneu._U00089 | Mycoplasma pneumoniae M129 | Firmicutes-Mollicutes | Mycoplasmatales | U00089 |
| Myco.pulm._AL445565 | Mycoplasma pulmonis | Firmicutes-Mollicutes | Mycoplasmatales | AL445565 |
| Myco.pulm._U06833 | Mycoplasma pulmonis | Firmicutes-Mollicutes | Mycoplasmatales | U06833 |
| Myco.smeg._CP000480 | Mycobacterium smegmatis str. MC2 155 | Actinobacteria | Actinobacteridae | CP000480 |
| Myco.spec._CP000384 | Mycobacterium species MCS | Actinobacteria | Actinobacteridae | CP000384 |
| Myco.spec._CP000518 | Mycobacterium species KMS | Actinobacteria | Actinobacteridae | CP000518 |
| Myco.spec._CP000580 | Mycobacterium species JLS | Actinobacteria | Actinobacteridae | CP000580 |
| Myco.syno._AE017245 | Mycoplasma synoviae 53 | Firmicutes-Mollicutes | Mycoplasmatales | AE017245 |
| Myco.tube._AE000516 | Mycobacterium tuberculosis CDC1551 | Actinobacteria | Actinobacteridae | AE000516 |
| Myco.vanb._CP000511 | Mycobacterium vanbaalenii PYR-1 | Actinobacteria | Actinobacteridae | CP000511 |
| Neis.gono._AE004969 | Neisseria gonorrhoeae FA 1090 | Betaproteobacteria | Neisseriales | AE004969 |
| Neis.gono._AF482014 | Neisseria gonorrhoeae | Betaproteobacteria | Neisseriales | AF482014 |
| Neis.gono._DD110233 | Neisseria gonorrhoeae | Betaproteobacteria | Neisseriales | DD110233 |
| Neis.meni._AE002098 | Neisseria meningitidis MC58 | Betaproteobacteria | Neisseriales | AE002098 |
| Neis.meni._AL157959 | Neisseria meningitidis serogroup A strain Z2491 | Betaproteobacteria | Neisseriales | AL157959 |
| Neis.meni._AL162755 | Neisseria meningitidis serogroup A strain Z2491 | Betaproteobacteria | Neisseriales | AL162755 |
| Neis.meni._AM421808 | Neisseria meningitidis serogroup C FAM18 | Betaproteobacteria | Neisseriales | AM421808 |
| Neis.meni._DD001104 | Neisseria meningitidis serogroup B strain MC58 | Betaproteobacteria | Neisseriales | DD001104 |
| Neph.oliv._AF137379 | Nephroselmis olivacea chloroplast | Organelles | chloroplast | AF137379 |
| Nitr.euro._AL954747 | Nitrosomonas europaea ATCC 19718 | Betaproteobacteria | Nitrosomonadales | AL954747 |
| Nitr.euro._BX321857 | Nitrosomonas europaea ATCC 19718 | Betaproteobacteria | Nitrosomonadales | BX321857 |
| Nitr.eutr._CP000450 | Nitrosomonas eutropha C91 | Betaproteobacteria | Nitrosomonadales | CP000450 |
| Nitr.hamb._CP000319 | Nitrobacter hamburgensis X14 | Alphaproteobacteria | Rhizobiales | CP000319 |
| Nitr.mult._CP000103 | Nitrosospira multiformis ATCC 25196 | Betaproteobacteria | Nitrosomonadales | CP000103 |
| Nitr.wino._CP000115 | Nitrobacter winogradskyi Nb-255 | Alphaproteobacteria | Rhizobiales | CP000115 |
| Noca.farc._AP006618 | Nocardia farcinica IFM 10152 | Actinobacteria | Actinobacteridae | AP006618 |
| Nost.spec._BA000019 | Nostoc species PCC 7120 | Cyanobacteria | Nostocales | BA000019 |
| Novo.arom._CP000248 | Novosphingobium aromaticivorans DSM 12444 | Alphaproteobacteria | Sphingomonadales | CP000248 |
| Ochr.anth._CP000758 | Ochrobactrum anthropi ATCC 49188 | Alphaproteobacteria | Rhizobiales | CP000758 |
| Odon.sine._Z67753 | Odontella sinensis chloroplast | Organelles | chloroplast | Z67753 |
| Para.deni._CP000489 | Paracoccus denitrificans PD1222 | Alphaproteobacteria | Rhodobacterales | CP000489 |
| Para.symb._BX908798 | Parachlamydia-related symbiont UWE25 | Chlamydiae/Verrucomicrobia | Chlamydiae | BX908798 |
| Past.mult._AE006092 | Pasteurella multocida subsp. multocida str. Pm70 | Gammaproteobacteria | Pasteurellales | AE006092 |
| Pedi.pent._CP000422 | Pediococcus pentosaceus ATCC 25745 | Firmicutes-Bacilli | Lactobacillales | CP000422 |
| Phot.lumi._BX571872 | Photorhabdus luminescens subsp. laumondii TTO1 | Gammaproteobacteria | Enterobacteriales | BX571872 |
| Phot.prof._CR378666 | Photobacterium profundum SS9 | Gammaproteobacteria | Vibrionales | CR378666 |
| Porp.purp._U38804 | Porphyra purpurea chloroplast | Organelles | chloroplast | U38804 |
| Porp.yezo._AP006715 | Porphyra yezoensis chloroplast | Organelles | chloroplast | AP006715 |
| Proc.mari._AE017126 | Prochlorococcus marinus subsp. marinus str. CCMP1375 | Cyanobacteria | Prochlorales | AE017126 |
| Proc.mari._AE017165 | Prochlorococcus marinus subsp. marinus str. CCMP1375 | Cyanobacteria | Prochlorales | AE017165 |
| Proc.mari._AJ237851 | Prochlorococcus marinus ddlb | Cyanobacteria | Prochlorales | AJ237851 |
| Proc.mari._BX572093 | Prochlorococcus marinus MED4 | Cyanobacteria | Prochlorales | BX572093 |
| Proc.mari._BX572096 | Prochlorococcus marinus MIT9313 | Cyanobacteria | Prochlorales | BX572096 |
| Proc.mari._CP000111 | Prochlorococcus marinus str. MIT 9312 | Cyanobacteria | Prochlorales | CP000111 |
| Proc.mari._CP000551 | Prochlorococcus marinus str. AS9601 | Cyanobacteria | Prochlorales | CP000551 |
| Proc.mari._CP000552 | Prochlorococcus marinus str. MIT 9515 | Cyanobacteria | Prochlorales | CP000552 |
| Proc.mari._CP000554 | Prochlorococcus marinus str. MIT 9303 | Cyanobacteria | Prochlorales | CP000554 |
| Proc.mari._CP000576 | Prochlorococcus marinus str. MIT 9301 | Cyanobacteria | Prochlorales | CP000576 |
| Proc.spec._AJ011025 | Prochlorococcus species | Cyanobacteria | Prochlorales | AJ011025 |
| Prop.acne._AE017283 | Propionibacterium acnes KPA171202 | Actinobacteria | Actinobacteridae | AE017283 |
| Pseu.aeru._AE004091 | Pseudomonas aeruginosa PAO1 | Gammaproteobacteria | Pseudomonadales | AE004091 |
| Pseu.aeru._AE004581 | Pseudomonas aeruginosa PAO1 | Gammaproteobacteria | Pseudomonadales | AE004581 |
| Pseu.aeru._CP000438 | Pseudomonas aeruginosa UCBPP-PA14 | Gammaproteobacteria | Pseudomonadales | CP000438 |
| Pseu.aeru._CP000744 | Pseudomonas aeruginosa PA7 | Gammaproteobacteria | Pseudomonadales | CP000744 |
| Pseu.aeru._M31829 | Pseudomonas aeruginosa | Gammaproteobacteria | Pseudomonadales | M31829 |
| Pseu.aeru._X12644 | Pseudomonas aeruginosa | Gammaproteobacteria | Pseudomonadales | X12644 |
| Pseu.aeru._X12644 | Pseudomonas aeruginosa | Gammaproteobacteria | Pseudomonadales | X12644 |
| Pseu.aeru._X14404 | Pseudomonas aeruginosa | Gammaproteobacteria | Pseudomonadales | X14404 |
| Pseu.ento._CT573326 | Pseudomonas entomophila str. L48 | Gammaproteobacteria | Pseudomonadales | CT573326 |
| Pseu.fluo._CP000076 | Pseudomonas fluorescens Pf-5 | Gammaproteobacteria | Pseudomonadales | CP000076 |
| Pseu.fluo._CP000094 | Pseudomonas fluorescens PfO-1 | Gammaproteobacteria | Pseudomonadales | CP000094 |
| Pseu.halo._CR954246 | Pseudoalteromonas haloplanktis str. TAC125 | Gammaproteobacteria | Alteromonadales | CR954246 |
| Pseu.mend._CP000680 | Pseudomonas mendocina ymp | Gammaproteobacteria | Pseudomonadales | CP000680 |
| Pseu.puti._AE015451 | Pseudomonas putida KT2440 | Gammaproteobacteria | Pseudomonadales | AE015451 |
| Pseu.puti._AE016790 | Pseudomonas putida KT2440 | Gammaproteobacteria | Pseudomonadales | AE016790 |
| Pseu.puti._CP000712 | Pseudomonas putida F1 | Gammaproteobacteria | Pseudomonadales | CP000712 |
| Pseu.stut._CP000304 | Pseudomonas stutzeri A1501 | Gammaproteobacteria | Pseudomonadales | CP000304 |
| Pseu.syri._AE016853 | Pseudomonas syringae pv. tomato str. DC3000 | Gammaproteobacteria | Pseudomonadales | AE016853 |
| Pseu.syri._CP000058 | Pseudomonas syringae pv. phaseolicola 1448A | Gammaproteobacteria | Pseudomonadales | CP000058 |
| Pseu.syri._CP000075 | Pseudomonas syringae pv. syringae B728a | Gammaproteobacteria | Pseudomonadales | CP000075 |
| Psyc.arct._CP000082 | Psychrobacter arcticus 273-4 | Gammaproteobacteria | Pseudomonadales | CP000082 |
| Psyc.cryo._CP000323 | Psychrobacter cryohalolentis K5 | Gammaproteobacteria | Pseudomonadales | CP000323 |
| Psyc.ingr._CP000510 | Psychromonas ingrahamii 37 | Gammaproteobacteria | Alteromonadales | CP000510 |
| Psyc.sp.._CP000713 | Psychrobacter sp. PRwf-1 | Gammaproteobacteria | Pseudomonadales | CP000713 |
| Rals.eutr._AM260479 | Ralstonia eutropha H16 | Betaproteobacteria | Burkholderiales | AM260479 |
| Rals.eutr._CP000090 | Ralstonia eutropha JMP134 | Betaproteobacteria | Burkholderiales | CP000090 |
| Rals.meta._CP000352 | Ralstonia metallidurans CH34 | Betaproteobacteria | Burkholderiales | CP000352 |
| Rals.sola._AL646052 | Ralstonia solanacearum GMI1000 | Betaproteobacteria | Burkholderiales | AL646052 |
| Rals.sola._AL646063 | Ralstonia solanacearum GMI1000 | Betaproteobacteria | Burkholderiales | AL646063 |
| Rhiz.etli._CP000133 | Rhizobium etli CFN 42 | Alphaproteobacteria | Rhizobiales | CP000133 |
| Rhiz.legu._AM236080 | Rhizobium leguminosarum bv. viciae | Alphaproteobacteria | Rhizobiales | AM236080 |
| Rhod.balt._BX294144 | Rhodopirellula baltica SH 1 | Planctomycetes | Planctomycetales | BX294144 |
| Rhod.palu._BX572594 | Rhodopseudomonas palustris CGA009 | Alphaproteobacteria | Rhizobiales | BX572594 |
| Rhod.palu._CP000250 | Rhodopseudomonas palustris HaA2 | Alphaproteobacteria | Rhizobiales | CP000250 |
| Rhod.palu._CP000283 | Rhodopseudomonas palustris BisB5 | Alphaproteobacteria | Rhizobiales | CP000283 |
| Rhod.palu._CP000301 | Rhodopseudomonas palustris BisB18 | Alphaproteobacteria | Rhizobiales | CP000301 |
| Rhod.palu._CP000463 | Rhodopseudomonas palustris BisA53 | Alphaproteobacteria | Rhizobiales | CP000463 |
| Rhod.rubr._CP000230 | Rhodospirillum rubrum ATCC 11170 | Alphaproteobacteria | Rhodospirillales | CP000230 |
| Rhod.spec._CP000431 | Rhodococcus species RHA1 | Actinobacteria | Actinobacteridae | CP000431 |
| Rhod.spha._CP000143 | Rhodobacter sphaeroides 2.4.1 | Alphaproteobacteria | Rhodobacterales | CP000143 |
| Rhod.spha._CP000577 | Rhodobacter sphaeroides ATCC 17029 | Alphaproteobacteria | Rhodobacterales | CP000577 |
| Rhod.spha._CP000661 | Rhodobacter sphaeroides ATCC 17025 | Alphaproteobacteria | Rhodobacterales | CP000661 |
| Rick.cono._AE008680 | Rickettsia conorii str. Malish 7 | Alphaproteobacteria | Rickettsiales | AE008680 |
| Rick.feli._CP000053 | Rickettsia felis URRickettsiaRWXCal2 | Alphaproteobacteria | Rickettsiales | CP000053 |
| Rick.prow._AJ235273 | Rickettsia prowazekii strain Madrid E | Alphaproteobacteria | Rickettsiales | AJ235273 |
| Rick.typh._AE017197 | Rickettsia typhi str. Wilmington | Alphaproteobacteria | Rickettsiales | AE017197 |
| Sacc.degr._CP000282 | Saccharophagus degradans 2-40 | Gammaproteobacteria | Alteromonadales | CP000282 |
| Sacc.eryt._AM420293 | Saccharopolyspora erythraea NRRL2338 | Actinobacteria | Actinobacteridae | AM420293 |
| Sali.trop._CP000667 | Salinispora tropica CNB-440 | Actinobacteria | Actinobacteridae | CP000667 |
| Salm.ente._AE014613 | Salmonella enterica subsp. enterica serovar Typhi Ty2 | Gammaproteobacteria | Enterobacteriales | AE014613 |
| Salm.ente._AE016842 | Salmonella enterica subsp. enterica serovar Typhi Ty2 | Gammaproteobacteria | Enterobacteriales | AE016842 |
| Salm.ente._AE017220 | Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 | Gammaproteobacteria | Enterobacteriales | AE017220 |
| Salm.ente._AL627266 | Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18 | Gammaproteobacteria | Enterobacteriales | AL627266 |
| Salm.ente._CP000026 | Salmonella enterica subsp. enterica serovar Paratyphi A str. | Gammaproteobacteria | Enterobacteriales | CP000026 |
| Salm.typh._AE008717 | Salmonella typhimurium LT2 | Gammaproteobacteria | Enterobacteriales | AE008717 |
| Shew.balt._CP000563 | Shewanella baltica OS155 | Gammaproteobacteria | Alteromonadales | CP000563 |
| Shew.balt._CP000753 | Shewanella baltica OS185 | Gammaproteobacteria | Alteromonadales | CP000753 |
| Shew.deni._CP000302 | Shewanella denitrificans OS217 | Gammaproteobacteria | Alteromonadales | CP000302 |
| Shew.loih._CP000606 | Shewanella loihica PV-4 | Gammaproteobacteria | Alteromonadales | CP000606 |
| Shew.onei._AE014299 | Shewanella oneidensis MR-1 | Gammaproteobacteria | Alteromonadales | AE014299 |
| Shew.onei._AE015625 | Shewanella oneidensis MR-1 | Gammaproteobacteria | Alteromonadales | AE015625 |
| Shew.putr._CP000681 | Shewanella putrefaciens CN-32 | Gammaproteobacteria | Alteromonadales | CP000681 |
| Shew.spec._CP000444 | Shewanella species MR-7 | Gammaproteobacteria | Alteromonadales | CP000444 |
| Shew.spec._CP000446 | Shewanella species MR-4 | Gammaproteobacteria | Alteromonadales | CP000446 |
| Shew.spec._CP000469 | Shewanella species ANA-3 | Gammaproteobacteria | Alteromonadales | CP000469 |
| Shew.spec._CP000503 | Shewanella species W3-18-1 | Gammaproteobacteria | Alteromonadales | CP000503 |
| Shig.flex._AE005674 | Shigella flexneri 2a str. 301 | Gammaproteobacteria | Enterobacteriales | AE005674 |
| Shig.flex._AE014073 | Shigella flexneri 2a str. 2457T | Gammaproteobacteria | Enterobacteriales | AE014073 |
| Shig.flex._AE016979 | Shigella flexneri 2a str. 2457T | Gammaproteobacteria | Enterobacteriales | AE016979 |
| Shig.flex._CP000266 | Shigella flexneri 5 str. 8401 | Gammaproteobacteria | Enterobacteriales | CP000266 |
| Sili.pome._CP000031 | Silicibacter pomeroyi DSS-3 | Alphaproteobacteria | Rhodobacterales | CP000031 |
| Sili.spec._CP000377 | Silicibacter species TM1040 |